Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1439 ATGAGACGTGGAATTACCATGATCTTGCACGAAGAGACACGTGGCATAAGAAGAAGGGATGTTATCGCTTACTTGGTTCGCCAGCTTGAAGCAGAACCACAAATCCCATACATATTTTCCGAATATCGTTATCCCTCGCCTGGCCGAGTTATCATCATTGTTTGTGGCTATAACCTAATTCCCAAACACAACGCAATCAATCTGCTGAAAACTTGCAGTGTGCTGTCAGCGGAGAGAAGTTCTATTTCTAGTTTCTTCTCTCCCCAGTTATTCAATCCATTTTGGTTTTGTTCACTGCCAAATCCTATCCTCTTGAATATTCACTATACCGTTTTTGAATTGTTTGCCTTTGTGTCAATTAATCAAAGCAAATTCTCATACATAAATCTTCAATCGATGATGGACTTGACGGCGAAGCTTCATCTCCTTGAGCTCAGTTCAAGCTTCCTTACCGGCACAGTCATTTTGGACACACGGAAAGCCGCTGTACGACCTTACATTCGGCCAGCTTCAAATCGTGTGCTTTCTCAAACCCTTAGAGGTAATACTAATTTAGTTAAATCCACTCAATTTATTGGTCCTAGAAGAGCGAATCTTAGTATCGCTGCTAGTTCATCCGCGGTTGCCGTCGAGACATCGGCGGAAGAATCTACTATCGAAGAGGACATTGAGTCTTTGTTTTCGGACTCTTCGGTTAATGAATTTGAGAAAAAACGTGTGAATAAGCAACAGAATACCGGGGCGTCGAGCATTTCATCTGGTGTTAAGTTAGAGAATGTGAGCAAAAGCTACAAGGGCGTTACTGTCTTGAAAGATGTCAGTTGGGAAGTGAAAAAAGGTGAAAAGGTGGGATTGGTTGGTGTAAATGGTGCGGGTAAGACGACACAGATGAGAATTATTGCTGGTCAGGAGGAGCCAGATTCAGGAAATGTAATAAAAGCCAAACCAAATATGAAAATTGCTTTTCTGAGTCAGGAATTTGAGGTATCTCTTAGTAGGACCGTGAGGGAGGAATTTCTAAATGCATTTAAGGAGGAGATGGAGATAGCAGGGAAGTTGGAGAAGGTGCAGAAGGCACTCGAGGGCGCTGTTAACGATTTAGAATTGATGGGGAGGCTTTTAGACGAGTTTGATTTGCTTCAGAAGAAGGCCCAGGCAGTGAACTTGGATGTAGTAGATGCCAAGGTAAGCAAATTGATGCCAGAACTTGGGTTTTCTCCAGATGATTCAGACAGGCTGGTGGCGTCATTTAGTAGTGGATGGCAGATGAGGATGTCCCTGGGAAAGATTTTACTTCAGGAGCCAGATTTATTACTGTTGGATGAACCAACAAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGGGTATCTTAACAAGCAAGATGTGCCTATGGTTATCATTTCCCATGACAGAGCTTTCCTTGATCAACTGTGTACAAAAATCGTGGAAACTGACATGGGTGTATCCAGAACATATGGGGGCAATTATTCCCAGTATGTAATTTCGAAGGCAGCATGGATTGAAGCACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAAGGACTTAATAAACAGGTTAGGTGCTGGAGTGAATTCTGGCCGGGCTTCATCTGCTGAGAAGAAGCTGGAGAAGCTTCAAGAAGAGGAACTAGTAGAGAAGCCATTTCAACGGAAACAAATGAAAATTAGGTTCCCTGAGCGTGGAAGTAGTGGAAGATCCGTTGCAACAATTAAGAACTTGGAATTTGGCTTTGAGGATAAAGTGCTCTTCAAGAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTGCTGAAGCTCATAATGGGTTTAGAGAAGCCAAATGGGGGTGAAGTTGTGCTGGGGGAGCATAATGTATTACCTAACTATTTTGAGCAAAATCAGGCTGAGGCGCTTGATCTGGAGAAGACAGTGCTTGAGACAATAGAAGAAGCTGCCGAGGACTGGAAGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGATCGGAAAGTTTCCCTATTGAGTGGCGGTGAGAAGGCACGTTTGGCTTTTTGCAAATTTATGGTAACACCGTCAACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAATGAGTACCAGGGCACTGTTATTACAGTGTCTCATGATCGATACTTCATAAAGCAGATAGTTAATAGAGTCATAGAAGTTAAAGATGGAACTATACAGGATTATGCTGGCAACTATAATTACTATTTAGAAAAGAATCTTGATGCTAGAGCTAAGGAGCTTGAACGTGAGGCAGAGCTTGAAGAGAAAGCTCCAAAAGTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCACGGAAGAAACAAAAGATGCAAGCTTTTCAGTCAGCAAAGCAGAAGTCTAAAGGGTCGAAAAATGCGAAGAGATGGAATTGA 2550 0.4224 MRRGITMILHEETRGIRRRDVIAYLVRQLEAEPQIPYIFSEYRYPSPGRVIIIVCGYNLIPKHNAINLLKTCSVLSAERSSISSFFSPQLFNPFWFCSLPNPILLNIHYTVFELFAFVSINQSKFSYINLQSMMDLTAKLHLLELSSSFLTGTVILDTRKAAVRPYIRPASNRVLSQTLRGNTNLVKSTQFIGPRRANLSIAASSSAVAVETSAEESTIEEDIESLFSDSSVNEFEKKRVNKQQNTGASSISSGVKLENVSKSYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLSQEFEVSLSRTVREEFLNAFKEEMEIAGKLEKVQKALEGAVNDLELMGRLLDEFDLLQKKAQAVNLDVVDAKVSKLMPELGFSPDDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTYGGNYSQYVISKAAWIEAQYAAWEKQQKEIEQTKDLINRLGAGVNSGRASSAEKKLEKLQEEELVEKPFQRKQMKIRFPERGSSGRSVATIKNLEFGFEDKVLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPNGGEVVLGEHNVLPNYFEQNQAEALDLEKTVLETIEEAAEDWKIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVITVSHDRYFIKQIVNRVIEVKDGTIQDYAGNYNYYLEKNLDARAKELEREAELEEKAPKVKAKSKMSKAEKEARKKQKMQAFQSAKQKSKGSKNAKRWN 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1439 849 Coils Coil 809 838 - -
Lele22g1439 849 Pfam ABC transporter 598 729 IPR003439 GO:0005524
Lele22g1439 849 Gene3D - 544 812 IPR027417 -
Lele22g1439 849 CDD ABCF_EF-3 583 774 - -
Lele22g1439 849 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 582 797 IPR003439 GO:0005524
Lele22g1439 849 Pfam ABC transporter 270 445 IPR003439 GO:0005524
Lele22g1439 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 251 522 IPR027417 -
Lele22g1439 849 FunFam Putative ABC transporter ATP-binding component 256 540 - -
Lele22g1439 849 Gene3D - 251 535 IPR027417 -
Lele22g1439 849 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 255 513 IPR003439 GO:0005524
Lele22g1439 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 564 789 IPR027417 -
Lele22g1439 849 ProSitePatterns ABC transporters family signature. 417 431 IPR017871 GO:0005524|GO:0016887
Lele22g1439 849 Coils Coil 787 807 - -
Lele22g1439 849 Pfam ABC transporter 484 571 IPR032781 -
Lele22g1439 849 ProSitePatterns ABC transporters family signature. 701 715 IPR017871 GO:0005524|GO:0016887
Lele22g1439 849 CDD ABCF_EF-3 255 485 - -
Lele22g1439 849 SMART AAA_5 606 774 IPR003593 -
Lele22g1439 849 SMART AAA_5 279 489 IPR003593 -
Lele22g1439 849 MobiDBLite consensus disorder prediction 801 829 - -
Lele22g1439 849 FunFam ABC transporter ATP-binding protein 542 811 - -
Lele22g1439 849 MobiDBLite consensus disorder prediction 801 849 - -
Lele22g1439 849 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 254 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1439 Lele-ChrLele22 20168461 20174296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1439 584 799 Calmodulin-binding Proteins AT2G36910 25.620 2.04e-13 72.8