Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1413 ATGTTGGTCCCAGGGACTGGCTGGCTGGTAGATTGGGAGCCTTCTAGAGTTGGGATGAATAGCGTGTTCAGTGAGCAGATTCTTGCGGACAAGCTTTCGAAGCTTAACAGCACCCAGCAGTGTATTGAAAGTATCCTTTCATTGGCTTCCTTTTATCTATATGTATCAAAATTGTTAATAGAATCATGTGACATTTATAATTGCGCTCGGCTGGGATCAGAGACGATAAAGACCTATAAAGTATCACTTTTGATTGCTAATTCAGCTAATTATTCTCTGAAACTCATAATTTGTTCTTACCCACGAGTTGATGTTACAATGAGAAACAGCAAGAGGAAAGGAAATGAATTTGTGACTGAGTTTTGGAAGGTCCTTCCTGCTGCACTTAAAGATGTTATTGAGAAAGGTGATGATCATGGAAAGAATGTGGTATCTAGATTGGTTGATATATGGGAGCAAAGGAGGGTGTTTGGATCTCGGGCACGGAATCTTAAAGATGTAATGCTTGGAGAAGAAGCACCTCCACTATTGGAATTCAACAAAAAGCGATCTCGTTCTGTCAGAATTATGAAAAGGGATTCTCGCCACATTAGAACGAAATTGTCCATTGGAGGTGCAGCAGAAAAAATAGTCTCTGCATTTCATTTGGTGCTCAGTGAACAAATGAGTGAAGATGCAGAGATGAAAAAATGCAAGTCTGCTGTTCATCGTGTAAGAAAGATGGAGAAAGATGTTGATATTGCATGCTCTATTGTAAAGGATCCAAACCGAAATACTTTGGCAAAGGGACTAGAGGAGGAAGAAAATCTCTTGAGACAATGCATTGAAAAACTTAAATTAGTTGAAGCAAGTAGAGTAGCAGTCGTATCACAGTTGAAAGAAGCTTTGCATGAGCAGGAATCTGAACTGGAGAATATTCGTACTCAAGTGCAGGTGGCAGAAGCACAAGTTGAGGAGGCTAGCAACATGAGGAAACGACTAGATGACGACAACTTTGTGCAGAAAGCATCCACTTTGGCGACTGATGCAAATACGAAATCAGAAGCACCAAATAAGAAGTCGGCTGCTGCAATTGCTGCTGAGGTTGCAGATAAGCTTGCGGCTTCTTCCTCTTCCCAATTGATCATGACCTCTGTTCTCTCAACATTTGCGGCCGAAGAGGCAAAAAATGCTGGTCTAGCTTCCGCGTCCTCCTCAAACCCCGACAAGTCGTCCTCACCCGCATCAGATCCCAATGTTTATAGGTCTACACAGCAAATGATTCCTGCCCCTAATCATTCATTTCCTTCAGTTATGGTGGCCCAACCAACAATGCAAAATCAAGCCCCTGCATCACAAGGTCAATATCATTTGGTCGGTAATCCAACCTCGCAGCAGTATATGCAATCAACAGCGGTAATCCCTGGTTATGGTTATGGAAATATCGCTCCCTTACCACCTGGACCGCTTCCACCCCCACCTCCACCACACATGGTGGCACCGGTATTGCCTATGGCACATCAGACGCTACAAATAAGCCAGCATCAGCTTACGCCTATAAACCAGCAGAAATCGTTAACAATGACGCAGCAAGCCCCACTACCGCCCAGTTTCCGGCCTCTCCAGCCGTCAGGAATGGTATATTATGGTAATCACCACCATTCTTTATGA 1650 0.4364 MLVPGTGWLVDWEPSRVGMNSVFSEQILADKLSKLNSTQQCIESILSLASFYLYVSKLLIESCDIYNCARLGSETIKTYKVSLLIANSANYSLKLIICSYPRVDVTMRNSKRKGNEFVTEFWKVLPAALKDVIEKGDDHGKNVVSRLVDIWEQRRVFGSRARNLKDVMLGEEAPPLLEFNKKRSRSVRIMKRDSRHIRTKLSIGGAAEKIVSAFHLVLSEQMSEDAEMKKCKSAVHRVRKMEKDVDIACSIVKDPNRNTLAKGLEEEENLLRQCIEKLKLVEASRVAVVSQLKEALHEQESELENIRTQVQVAEAQVEEASNMRKRLDDDNFVQKASTLATDANTKSEAPNKKSAAAIAAEVADKLAASSSSQLIMTSVLSTFAAEEAKNAGLASASSSNPDKSSSPASDPNVYRSTQQMIPAPNHSFPSVMVAQPTMQNQAPASQGQYHLVGNPTSQQYMQSTAVIPGYGYGNIAPLPPGPLPPPPPPHMVAPVLPMAHQTLQISQHQLTPINQQKSLTMTQQAPLPPSFRPLQPSGMVYYGNHHHSL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1413 549 Pfam CID domain 27 159 IPR006569 -
Lele22g1413 549 Coils Coil 289 330 - -
Lele22g1413 549 MobiDBLite consensus disorder prediction 393 415 - -
Lele22g1413 549 Gene3D - 20 168 IPR008942 -
Lele22g1413 549 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 19 545 - -
Lele22g1413 549 SMART 558neu5 27 170 IPR006569 -
Lele22g1413 549 ProSiteProfiles CID domain profile. 20 173 IPR006569 -
Lele22g1413 549 Coils Coil 264 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1413 Lele-ChrLele22 19926547 19933075 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1413 22 19926547 19933075 Lele21g1426 21 22723912 22727196 CCT
Lele22g1413 22 19926547 19933075 Lele22g1418 22 19979104 19982754 CCT
Lele22g1413 22 19926547 19933075 Lele23g0587 23 4398629 4400597 CCT
Lele22g1413 22 19926547 19933075 Lele24g1371 24 19747063 19750715 CCT
Lele22g1413 22 19926547 19933075 Lele22g1413 22 19926547 19933075 ECH
Lele22g1413 22 19926547 19933075 Lele23g0594 23 4436143 4444362 hybridization
Lele22g1413 22 19926547 19933075 Lele24g1365 24 19694902 19699520 hybridization