Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1408 ATGGCGGCTACTCTTGCTTGGAGGCTTGGTTCCAATAATGGCGGCAGCCTTGCTGCTAATGATATGGAAAGAAATGGCGAGGGAAACATTCCAGATTCAGAGCCCCCAACTCCGCACTCTGTTTTGAAGATGGGATCGAGGGGAAAATCTCATACTTCAGCTATCCAACTTAAGTTTCTTACATCCTTCACTGGTTGCAGAGAGCGCGGCAGCAGCATGGAGGATCCAGATGGGACATTAGCAAGTGTAGCCCAATGCATTGAGCAGCTGCGACAGAGCTCATCCTCCGCACAAGAGAAGGAGTACTCCTTGAAGCAGTTATTGGAGCTTATTGATATGCGCGAAAATGCGTTCAGTGCTGTTGGATCTCATTCTCAGGCAGTACCAGTGCTTGTTTCTCTTCTCCGATCTGGTTCATTGAGTGTGAAGATTCAGGCAGCGACTGTTTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGAGTGAAAGTCTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTAAAATCCAGTTCAGCCGAAGGTCAAGTTGCTGCTGCAAAGACTATTTACGCTGTCTCTCAAGGTGGCTCAAAAGACCATGTTGGATCAAAAATTTTTTCAACTGAAGGAGTGGTACCTGCGCTGTGGGAGCAGCTGCAGAAAGGGCTGAAGACTGGAAATGTAGTTGATGGTTTATTGACCGGAGCCTTGAAAAACCTGTCCAGTAATACTGAGGGATTCTGGAATGCAACAATACAAGCTGGAGGAGTGGACATATTAATGAAGTTATTGACAACAGGGCATCCTAGCACTTTAGCTAATGTGTGCTTCTTACTTGCCAGCATGATGATGGAGGATGCATCTGTTTGTTCAAAACTGTTGACTTCAGAGGCGACAAAACAACTCCTGAAATTATTAGGCGCTGGTAATGATGCCCCTGTTAGAGCTGAAGCAGCTGGTGCTCTGAAATCTTTGTCTTCTAAGTGCAAAGAAGCAAGGCGTGAGATAGCTAATTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCAAAAGAGTTCATGCAGGGTGAGCATGCTCAATCATTGCAGGAAAATGCTATGTGTGCTCTAGCTAACATCTCTGGTGGTTTGTCTTACGTGATCTCCAGTCTTGGTCAAAGCCTTGAATCATGCTCCTCAGCTACTCAAATTGCAGATACACTAGGGGCTTTGGCTTCAGCTCTTATGATATATGATAAAAAGGCCGAAGCTACTAGGACATCAGATCCGCTGGTAGTTGAGCAAACATTGCTCGAGCAATTCAAATCTCATTCTCCGTTTCTTGTGAAGGAAAGAACAATTGAAGCCCTGGCTAGTTTGTATGGAAATCCCGTACTGTCAATTAAACTCGTAAATTCATATGCAAAACATTTGCTAGTTGGATTAATAACGATGGCTGTTAATGAAGTACAAGATGACCTTATAAGGGCTCTCCTTACATTGTGCAACAATGAAGGCAGTCTTTGGCTTGCCCTTCAGGGCCGTGAAGGAGTTCAACTGTTGATATCTCTCCTAGGGCTCTCATCAGAACAACAGCAAGAGTGTGCAGTTGCTCTGCTATGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGCGGTATACCTCCATTAGTTCAAATTTTGGAGACAGGATCCACAAAAGCAAAGGAAGACTCAGCAAAGATCCTTACAAACCTGTGCAATCACAGCGAAGATATACGTGCTTGTGTGGAGAGTGCTAATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGGAGCTCAAATGGGAAGGAGATAGCGGCGAAAACCTTAAATCACTTAATTCATAAATCTGATACCACCACAATCAGCCAGCTTACAGCACTATTGACAAGTGATCTACCTGAATCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTGTCAGTAGCCCCTCTTAGCGACATTCAGCGAGAAGGTAGCGCTGCAAGTGATGCAATTGATACGATGATAAAATTAATGAGCTCTACCAATGAAGAAACTCAGGCTAAGTCAGCATCAGCTCTAGCAGGCATCTTTGAATTGAGGAAAGATGTGCGTGAAAGCAGCGTCGCAGTTAAAGCCCTTTTGTCTGCCATGAAGTTGCTTGATATTGAATTTGAAGGCATCCTGATAGAGTCTTCACGCTGCCTTGCAGCAATATTTCTTTCGATTAAAGAGAACAAGGATATAGCTGCTGTTGGTAGAGATGCTTTACTCCCCTTAGTTGCACTAGCAAATTCTTCTACTTTGGAAGTTGCAGAGTTGGCAACATGTGCGGTGGCTAATCTTATTTTAGATAGTGAGATTTCAGAGAAAGCTGTTGCCAAAGAAATTATCATCCCAGCTACCAGAGTATTACGTGAAGGTACAATATCTGGAAAGACACATGCAGCATCAGCAATTGGTCGGCTCATACATTCTCGACAAGTTGATTATTCTATAACTGAATGTGTGAATCGTGCTGGGACGGTACTTGCTCTGGTTTCCTTCCTGGATTCTGCTATTAATGGATCAGTTTCCACGTCTGAGGCTATAGAAGCACTTGCTGTTCTGTCCAGGTTGGAACCGAGCAGTGCACATGTTAAACCAGCATGGGCTGTATTGGCTGAATTCCCTGAAAGCATAAACCCAATAGTGCTGTCTATTACTGATTCAACACCAGTGTTTCAGGATAAAGCTATCGAGATATTATCCCAGTTATGCAGGGATCAGCCTGTTGTTCTTGGAAACAATGTTGTTGCGGCCTCAGGATGCTTGTGTTCATTGGCTAAAAGGGTAATTGGTACCAAAAATGTAAAGGTTAAAATTGGGGGAGCTGCACTTCTGATTTGTGCTGCCAAAGTAAACCACCGGAGACTGGTGGAGGAACTCAATCAATCAAACTTGTGTTGTGATCTTGTTCACTCTCTTTCTTCTGCACCATCTTGTTTTGCAAACCGGGGTGAAGAAAAAAAGGAACTCATTAGTATTTTGATACATATAAAAGAAGATGCCAATGTTGGTGTATCCAATACAGGTACTGCTAGTATATCCGATGCCAACTTAGCCATATGGTTATTGTCTATTCTTGCTTGTCATGATGAAAAATGCAAAATTGCTATAATGGAGGCTGGAGCAATTGACATTCTCACTGAAAGAATCTCAGACTGTTACTCACAATATACCCAGATTGATTATAAAGAAGATAGTAGCATGTGGATTTGTGCATTGTTGTTGGCTGTACTATTTCAAGATAGAGATATCATCAGAGCAAATGCAACCATGAAATCTATACCAGCTGTTGCCAGTTTATTGAAGTCGGAGGAATTAGGTAACAGATATTTTGCAGCACAATCAATAGCGAGCCTGGTCTGTAACGGTAGCAGGGGAACACTACTGTCTGTTGCGAACTCAGGGGCTGCAAGTGGGCTAATCTCCTTACTTGGCTGCGCTGACATTGATATACAAGACCTTCTGGACCTGTCAGAGGAATTCTCTTTGGTTCGTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTCAGAGTTGATGACATTAGGGTTGGTTCCACTTCGCGGAAGGCAATACCGGCACTTGTTGATCTACTCAAACCAATTCCAGATCGCCCAGGAGCACCTTTTTTAGCTCTTGGACTTCTAACTCAGCTCGCCAGAGATTGCCCATCTAATAAGATTGTAATGGTAGAATCTGGGGCCCTGGAGGCACTTACAAAGTATCTTTCATTGGGTCCACAAGATGCCACTGAAGAAGCTGCTACTGATCTACTCGGAATTCTTTTTGACAGTGCTGAGATACGGAGACATGAGGCAGCATTTGGTGCTGTTACTCAACTTGTAGCTGTGTTGCGTTTAGGGGGAAGAGGTGCAAGGTACAGTGCTGCCAGAGCCCTGGAAAATTTGTTCTCTGCTGATCAGATTAGGAATGCAGAGACTGCCCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAACACTGGTTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTCCTAAGTGAAAATCCTTCGAGAGCACTAGCTGTTGCTGATGTGGAAATGAATGCAGTGGATGTGCTTTGCAGGATCCTTTCCTCAAATTGTTCATTGGACCTCAAAGGTGACGCTGCTGAATTATGTTGTGTTCTGTTTGGAAATACACGGATTAGGTCCTCAGTGGCTGCTGCACGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGCGAGTTTAGTCCTGCCCAGCATTCAGTGGTCCGTGCACTGGATAGGCTTGTTGATGACGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCCATTATTCCTCTTGTTGGTCTTCTGTATGGTAGGAATTATTTGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTAGGGAAAGACAGACCTTCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTGGACATTCTCCATGAAGCACCTGATTATCTGTGTGCAGCATTTGCAGAATTGCTGCGTATATTGACCAATAATGCCAGCATAGCTAAAGGGAAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTATGTTGCTGACGAGGCAAGAATTTGGGCCTGATGGACAGCACAGTGTGTTGCAGGTTTTGGTTAATATCTTGGAACATCCACAATGTCGTGCTGACTATACATTGACATCCCACCAAGCTATTGAACCACTTATCCCCTTGCTTGATTCTTCAATACCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCGCATCTGCTTTTGGAAGAACACCTTCAGAAGGATCCAGCTACACAGCAGGTAATTGGTCCTCTTATTCGAGTTCTTGGTTCTGGTATCCACATATTGCAGCAGAGAGCTGTGAAGGCCCTGGTTAGTATTGCACTGATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAACTTTCAAAAGTGATACTGCATGCTGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTGTGTTTTGTCATGTATTCTGCAATTCAGTTCTGAATTCTACTTGGAAGTGCCTATTGCCGTGTTGGTAAGATTGCTTCGTGCTGGCTCAGAGAGCACTGTTATTGGCGCATTAAATGCTCTTCTAGTGTTGGAAAGCGATGATGGTACCAGTCCAGAAGCAATGGCTGAAAGCGGTGCCATAGAGGCTCTCTTAGAGCTTCTAAGATCTCATCAGTGCGAGGAAACTGCTGCTAGACTACTGGAAGTATTGCTAAACAACGTCAAGATCAGAGAATCGAAAGCTACCAGATCAGCCATAGTACCGTTATCCCAGTACCTCTTGGATCCACAAACCCAAGGACAGCAGGCAAGGTTACTGGCAACTTTGGCTCTTGGCGATCTATTTCAGAATGAGAGTCTTGCTCGAACAAGTGATGCAGTTTCAGCATGTCGTGCTTTGGTGAATGTGCTTGAAGATCAGCCAACAGAAGAAATGAAAGTTGTAGCTATATGTGCTCTGCAGAACCTTGTGATGCATAGTCGGTCAAATAGAAGAGCTGTTGCTGAGGCTGGTGGGGTACAGGTTGTATTGGATCTGATAGGTTCTAGTGATCCAGAAACATCTCTTCAGGCTGCAATGTTCGTTAAACTTCTCTTCTCTAATAATACAATTCAAGAATACGCTTCAAGTGAAACGGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAAGCGTGAATGATGAGTATTTGAGAGCCTTGAATGCTCTTTTTAGCAACTTCCCACGATTAAGAGCAACAGAGCCAGCAACACTTAGCATTCCCCATCTGGTTACATCATTAAAGACGGGCTCAGAGGCCACTCAAGAAGCTGCATTGGATGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGCCCAGCAGAAGTCTCAAGAGCTCAGTCGATAGCAGCTGCAGATGCTATTCCTTTGCTACAGTACTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTCTTATTGCAGTGTTTGCCTGGCACATTAGTTGTCATCATAAAGCGTGGTAACAACATGAAGCAGTCAGTTGGAAACCCAAGTGTTTACTGTAAGCTTACACTTGGCAACACTCCTCCAAAGCAAACCGCGGTGGTCTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCGTGGTCCTTTGAGAGCCCTCCTAAGGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATCGATCGCGTGGTAATGCTGGGATCTGTTGCCGGAGAATACACTCTTCTACCGCAAAGTAAAAGTGGTCCCCCAAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAATGA 6504 0.4422 MAATLAWRLGSNNGGSLAANDMERNGEGNIPDSEPPTPHSVLKMGSRGKSHTSAIQLKFLTSFTGCRERGSSMEDPDGTLASVAQCIEQLRQSSSSAQEKEYSLKQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPALWEQLQKGLKTGNVVDGLLTGALKNLSSNTEGFWNATIQAGGVDILMKLLTTGHPSTLANVCFLLASMMMEDASVCSKLLTSEATKQLLKLLGAGNDAPVRAEAAGALKSLSSKCKEARREIANSNGIPALINATIAPSKEFMQGEHAQSLQENAMCALANISGGLSYVISSLGQSLESCSSATQIADTLGALASALMIYDKKAEATRTSDPLVVEQTLLEQFKSHSPFLVKERTIEALASLYGNPVLSIKLVNSYAKHLLVGLITMAVNEVQDDLIRALLTLCNNEGSLWLALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSSNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALRSMLSVAPLSDIQREGSAASDAIDTMIKLMSSTNEETQAKSASALAGIFELRKDVRESSVAVKALLSAMKLLDIEFEGILIESSRCLAAIFLSIKENKDIAAVGRDALLPLVALANSSTLEVAELATCAVANLILDSEISEKAVAKEIIIPATRVLREGTISGKTHAASAIGRLIHSRQVDYSITECVNRAGTVLALVSFLDSAINGSVSTSEAIEALAVLSRLEPSSAHVKPAWAVLAEFPESINPIVLSITDSTPVFQDKAIEILSQLCRDQPVVLGNNVVAASGCLCSLAKRVIGTKNVKVKIGGAALLICAAKVNHRRLVEELNQSNLCCDLVHSLSSAPSCFANRGEEKKELISILIHIKEDANVGVSNTGTASISDANLAIWLLSILACHDEKCKIAIMEAGAIDILTERISDCYSQYTQIDYKEDSSMWICALLLAVLFQDRDIIRANATMKSIPAVASLLKSEELGNRYFAAQSIASLVCNGSRGTLLSVANSGAASGLISLLGCADIDIQDLLDLSEEFSLVRYPDQVALERLFRVDDIRVGSTSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVTQLVAVLRLGGRGARYSAARALENLFSADQIRNAETARQAVQPLVEILNTGLEKEQHAAIATLVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSVAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPSCKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGKSASKVVEPLFMLLTRQEFGPDGQHSVLQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSSIPAVQQLAAELLSHLLLEEHLQKDPATQQVIGPLIRVLGSGIHILQQRAVKALVSIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAACVLSCILQFSSEFYLEVPIAVLVRLLRAGSESTVIGALNALLVLESDDGTSPEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRESKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNRRAVAEAGGVQVVLDLIGSSDPETSLQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWATGSVNDEYLRALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPKQTAVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYTLLPQSKSGPPRNLEIEFQWSNK 2167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1408 2167 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2046 2167 - -
Lele22g1408 2167 ProSiteProfiles C2 domain profile. 2027 2144 IPR000008 -
Lele22g1408 2167 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 61 2167 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lele22g1408 2167 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1396 1630 - -
Lele22g1408 2167 Gene3D - 1666 2044 IPR011989 -
Lele22g1408 2167 Gene3D - 1194 1380 IPR011989 -
Lele22g1408 2167 SUPERFAMILY ARM repeat 1694 2044 IPR016024 -
Lele22g1408 2167 SUPERFAMILY ARM repeat 555 929 IPR016024 -
Lele22g1408 2167 Gene3D - 633 836 IPR011989 -
Lele22g1408 2167 SMART arm_5 114 155 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 837 879 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 331 380 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 288 329 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 156 196 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1245 1286 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1455 1495 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 501 543 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 666 706 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1582 1623 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 587 627 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1746 1785 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1200 1243 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 752 791 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1873 1913 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 792 832 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1414 1454 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1497 1537 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 1327 1368 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 545 585 IPR000225 GO:0005515
Lele22g1408 2167 SMART arm_5 245 286 IPR000225 GO:0005515
Lele22g1408 2167 Gene3D C2 domain 2045 2167 IPR035892 -
Lele22g1408 2167 Gene3D - 71 433 IPR011989 -
Lele22g1408 2167 Gene3D - 1381 1663 IPR011989 -
Lele22g1408 2167 SMART C2_3c 2047 2143 IPR000008 -
Lele22g1408 2167 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2046 2151 IPR035892 -
Lele22g1408 2167 CDD C2 2048 2138 - -
Lele22g1408 2167 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 556 598 IPR000225 GO:0005515
Lele22g1408 2167 Coils Coil 317 337 - -
Lele22g1408 2167 SUPERFAMILY ARM repeat 77 663 IPR016024 -
Lele22g1408 2167 Pfam Armadillo/beta-catenin-like repeat 124 154 IPR000225 GO:0005515
Lele22g1408 2167 Pfam Armadillo/beta-catenin-like repeat 545 584 IPR000225 GO:0005515
Lele22g1408 2167 Pfam C2 domain 2046 2136 IPR000008 -
Lele22g1408 2167 MobiDBLite consensus disorder prediction 12 46 - -
Lele22g1408 2167 Gene3D - 434 632 IPR011989 -
Lele22g1408 2167 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1841 1884 IPR000225 GO:0005515
Lele22g1408 2167 Gene3D - 837 1185 IPR011989 -
Lele22g1408 2167 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1212 1256 IPR000225 GO:0005515
Lele22g1408 2167 SUPERFAMILY ARM repeat 1035 1395 IPR016024 -
Lele22g1408 2167 SUPERFAMILY ARM repeat 1421 1707 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1408 Lele-ChrLele22 19883012 19893752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1408 518 640 U-box Gene Family AT2G23140 40.323 2.05e-10 63.9