Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1397 ATGAAAGCACTCAAACCTTTCAACCCTCCTTCATCTTCTTCTTCGCATTCTCCCCTCAATTCCTCCATCCAAACAAGTCCCATCAGGCTCAAGCAGCTCACACCATCTCAAATTCAAGAAATTCAATCCCAAATCCACACCAAACGTCGCCGTTTGACTCAGAAATCCCTCCCCATGAAGCAACCTGAGGAAGCTGCTTTAGCCTACGACAACGCAGCTTATAAGCTCAGAGGAGATTTCGCTCGGCTCAATTTCCCCCACTTTCGCCACCACGGAGCTCATGTGATTTCTGAATTCGGCGATTACAAGCCTCTTCACTCGTCTGTGCACTCCAAGCTCCAAGCTATATGTGAAAGCTTAGCACTCAGTTCCCAGAAAAGGGGGAATGCAGATCAGCCTCATCATCAGAACACAGAGGATTGTACTACCCTCTCCAACTTAGCCTCGTCTTCGTCCGATGAATCGGAGATTACTTACTTGGATTTCCCGGATTCTAAAGTGGATGAAACAGAGTTTGTTGGTTTGGACAAGTATCCTTCCATTGAGATTGATCGGTCTGCTATCTGA 567 0.4691 MKALKPFNPPSSSSSHSPLNSSIQTSPIRLKQLTPSQIQEIQSQIHTKRRRLTQKSLPMKQPEEAALAYDNAAYKLRGDFARLNFPHFRHHGAHVISEFGDYKPLHSSVHSKLQAICESLALSSQKRGNADQPHHQNTEDCTTLSNLASSSSDESEITYLDFPDSKVDETEFVGLDKYPSIEIDRSAI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1397 188 SUPERFAMILY DNA-binding domain 61 87 IPR016177 GO:0003677
Lele22g1397 188 MobiDBLite consensus disorder prediction 7 33 - -
Lele22g1397 188 MobiDBLite consensus disorder prediction 1 33 - -
Lele22g1397 188 Gene3D AP2/ERF domain 40 87 IPR036955 GO:0003700|GO:0006355
Lele22g1397 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 62 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1397 Lele-ChrLele22 19773558 19774250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1397 1 188 AP2-EREBP Transcription Factor Family AT4G39780 36.328 2.86e-35 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1397 22 19773558 19774250 Lele23g0611 23 4609818 4611419 hybridization
Lele22g1397 22 19773558 19774250 Lele24g1351 24 19570203 19578417 hybridization