Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1378 ATGGGAAGATCTCCGTTCAGTGATGAGAATGGTTTGAAGAAAGGTCCTTGGACCCCTGAAGAAGATCACAAGCTTGTTCACCACATTCAGAAACATGGCCATGGAAGCTGGAGATCTCTCCCTAAACTAGCTGGGCTCAACAGATGTGGAAAAAGTTGCCGGTTAAGATGGACCAATTACTTGAGACCAGACATAAAGAGAGGGAAATTTTCCAAAGAAGAAGAACAGAAAATTCTTAATCTCCATGCTATCCTCGGCAACAAATGGTCGGCGATTGCGAGGCACTTGCCTGGTCGTACTGATAATGAAATAAAGAATTTCTGGAACACCCACTTGAAGAAGAAGCTTATTCAAATGGGTTATGATCCTATGACTCATCAGCCTCGAACTGATATCTTCTCTAGTCTCTCTCATCTTCTTGCTCTTGCGAATCTTAAGCAAATTCTGGATCATAATGCTTCGAGCTTTCAATTTCTGCAACATCTTGTTCAACCTCATCATCAACCTCGTACCAGTCATCAAGCAAACACAAACGTTGTGAACATCATGGACAGTTTCACTCATTTGAATAATACACTTCATCAGTTAGATAGCAACAACGTTGTCAACAATGACTCCTCCATGTCTTTTTCCCACATGCCTGAGTTAATTACTCATTCTTCTTCTTCTTCTACCTATCAAGTACCTGCATTGATTAGTAAAGAAGACGTGGTTCAAATCCCAGAATATTGTACAGTGAACAATGAAGAAGATAGTGGTTGTTCTCCTAATAATTCCACGTGGCTTCACTCGTGTGTGAACACGCCATCTCCCTCTTTTGTTCAGGCCGAGACGACGGCGACAGCTACGGTGACACATGGCATCAGTAATAGTATCGCTTATAACTGCTCTACGCCGGCGGCTTGCTATTTCGGAGAAGTTATGGATCAATATATGTGGCCGGAGTCTGAACTGTTTCTAGAAGACCCTTTATTCCATGAGATTAATGCCTAG 993 0.423 MGRSPFSDENGLKKGPWTPEEDHKLVHHIQKHGHGSWRSLPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSKEEEQKILNLHAILGNKWSAIARHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDIFSSLSHLLALANLKQILDHNASSFQFLQHLVQPHHQPRTSHQANTNVVNIMDSFTHLNNTLHQLDSNNVVNNDSSMSFSHMPELITHSSSSSTYQVPALISKEDVVQIPEYCTVNNEEDSGCSPNNSTWLHSCVNTPSPSFVQAETTATATVTHGISNSIAYNCSTPAACYFGEVMDQYMWPESELFLEDPLFHEINA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1378 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele22g1378 330 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele22g1378 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele22g1378 330 Gene3D - 69 116 - -
Lele22g1378 330 SMART sant 13 63 IPR001005 -
Lele22g1378 330 SMART sant 66 114 IPR001005 -
Lele22g1378 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele22g1378 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele22g1378 330 FunFam Transcription factor MYB39 69 130 - -
Lele22g1378 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele22g1378 330 FunFam MYB-related transcription factor 13 66 - -
Lele22g1378 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele22g1378 330 Gene3D - 11 67 - -
Lele22g1378 330 CDD SANT 16 61 IPR001005 -
Lele22g1378 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 223 - -
Lele22g1378 330 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1378 Lele-ChrLele22 19574848 19576012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1378 1 210 MYB Transcription Factor Family AT5G10280 57.895 2.07e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele22g1378 Myb_DNA-binding 4.1e-16 CL0123