Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1372 ATGCACCTCCTGTTTGGCCTGGGTTTTTCTCAAACATCACATCGTCATCAGGGATCAAGGTTGATAGTTAGAGCAGATACAGATTACTATTCTGTCCTTGGGGTGTCAAGAAATGCCAGTAAATCTGAAATTAAGAGTGCTTATCGTAAACTTGCCCGGAGTTATCACCCAGATGTGAACAAAGAAGCTGGAGCAGAGCAGAAATTTAAGGAACTCAGCAATGCGTATGAGGTCTTATCAGATGATGAGAAGAGATCCATTTATGACACATACGGCGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGAGATTTCAGCAATCCATTTGATCTGTTTGAGACGCTGTTTGAGGGCATGGGGATGAATCGTGGCATGAACAACAGAGGCTCTTGGAATGGAGCTGTTGATGGTGAAGATGAATATTACAGTCTTGTCTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGACTAGAGAATTGTGGAACTTGCAATGGTACTGGGGCTAAGCCGGGGACCACGCCAACCAAATGTAGCACCTGTGGAGGCCAAGGTCGGGTTGTCTCATCAACAAGGACACCCTTAGGTATTTTCCAGCAGTCAATGATATGCTCTGCATGTAATGGAACTGGAGAAATTTCAACGCCTTGCAATACATGTTCTGGGGATGGTCGAGTGAGGAGAACAAAGCGGATAAGTCTGAAAGTTCCACCTGGTGTGGACTCTGGTAGCCGTTTAAGGGTCCGAAATGAAGGGAATGCTGGAAGACGGGGCGGTTCTCCGGGCGACCTCTTTGTTGTCATCGAAGTCATTCCAGATCCTGTCCTCAAGCGTGATGACACTAACATCCTATACACTTGTAAGGTGTCATACATTGATGCGATCTTGGGGGCTACAATCAAGGTTCCTACCGTAGATGGCACGGTTGATCTAAAAGTCCCAGCCGGGACCCAACCCAACACAACACTTGTCATGGCAAAGAAAGGTGTTCCCTTTCTGAATAAAAGCAATATGAGGGGAGATCAATTAGTTCGTGTGCAAGTTGAAATACCTAAAAGACTCAACAGTGAAGAAAGGAAGCTTATTGAGGAGCTTGCTGATTTAAGCAAAGGCAAGGCTGCGGCAAGTAGATGA 1155 0.4563 MHLLFGLGFSQTSHRHQGSRLIVRADTDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEAGAEQKFKELSNAYEVLSDDEKRSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGMNRGMNNRGSWNGAVDGEDEYYSLVLNFKEAVFGVEKEIEISRLENCGTCNGTGAKPGTTPTKCSTCGGQGRVVSSTRTPLGIFQQSMICSACNGTGEISTPCNTCSGDGRVRRTKRISLKVPPGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGATIKVPTVDGTVDLKVPAGTQPNTTLVMAKKGVPFLNKSNMRGDQLVRVQVEIPKRLNSEERKLIEELADLSKGKAAASR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1372 384 CDD DnaJ 28 81 IPR001623 -
Lele22g1372 384 Gene3D - 168 231 - -
Lele22g1372 384 SUPERFAMILY HSP40/DnaJ peptide-binding domain 283 369 IPR008971 GO:0006457|GO:0051082
Lele22g1372 384 Pfam DnaJ C terminal domain 143 358 IPR002939 -
Lele22g1372 384 Gene3D - 278 384 - -
Lele22g1372 384 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 155 234 IPR036410 -
Lele22g1372 384 FunFam Chaperone protein dnaJ A6 chloroplastic 25 128 - -
Lele22g1372 384 FunFam Putative Mitochondrial DnaJ chaperone 213 273 - -
Lele22g1372 384 TIGRFAM DnaJ_bact: chaperone protein DnaJ 28 374 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele22g1372 384 Gene3D DnaJ domain 25 129 IPR036869 -
Lele22g1372 384 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 17 381 - -
Lele22g1372 384 FunFam Molecular chaperone DnaJ 160 236 - -
Lele22g1372 384 ProSiteProfiles Zinc finger CR-type profile. 155 236 IPR001305 GO:0031072|GO:0051082
Lele22g1372 384 ProSiteProfiles dnaJ domain profile. 28 92 IPR001623 -
Lele22g1372 384 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Lele22g1372 384 MobiDBLite consensus disorder prediction 245 264 - -
Lele22g1372 384 PRINTS DnaJ domain signature 30 48 IPR001623 -
Lele22g1372 384 PRINTS DnaJ domain signature 64 84 IPR001623 -
Lele22g1372 384 PRINTS DnaJ domain signature 48 63 IPR001623 -
Lele22g1372 384 PRINTS DnaJ domain signature 84 103 IPR001623 -
Lele22g1372 384 SUPERFAMILY HSP40/DnaJ peptide-binding domain 136 290 IPR008971 GO:0006457|GO:0051082
Lele22g1372 384 Pfam DnaJ central domain 168 231 IPR001305 GO:0031072|GO:0051082
Lele22g1372 384 FunFam Chaperone protein dnaJ 1, mitochondrial 278 384 - -
Lele22g1372 384 Gene3D - 138 273 - -
Lele22g1372 384 Pfam DnaJ domain 28 89 IPR001623 -
Lele22g1372 384 Hamap Chaperone protein DnaJ [dnaJ]. 25 381 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele22g1372 384 CDD DnaJ_C 139 361 - -
Lele22g1372 384 SMART dnaj_3 27 84 IPR001623 -
Lele22g1372 384 CDD DnaJ_zf 168 231 IPR001305 GO:0031072|GO:0051082
Lele22g1372 384 SUPERFAMILY Chaperone J-domain 24 122 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1372 Lele-ChrLele22 19540723 19544246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1372 29 91 C2H2 Transcription Factor Family AT1G74250 46.377 7.88e-11 61.6