LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele22g1365	ATGCTGAGTCCTATTTCTGAAGGCACCTCTCCCTCACACTCTTCCCTGTTCTCTTCTTTTTCTTCTTCTTCTTTTCAACTCGATTCTCCTCTGAAACCAAAAGGAAATACAGCAGAAGATTGTTCAGAGAGAAACATAACAACAATGGAACGGTATGAGATAATCAAAGATATTGGGTCTGGGAATTTCGGTGTTGCCAAGCTCGTCAGAGAGAAACGCACCGGCGAGTTCTTCGCCGTCAAGTTCATTGAGAGAGGCTCCAAAATTGATGAGCATGTACAGAGAGAGATCACAAATCACAGATCCTTGAAACACCCTAATATCATTCGATTTAAAGAGGTTTTGCTGACTCCAACTCATCTAGCTATAGTCATGCAATATGCTGCTGGTGGAGAACTTTTTGAAAGAATATGTAATGCGGGAAGATTCAGTGAAGACGAGGCAAGATACTTCTTTCAACAATTGATCTCTGGTGTGAGCTATTGTCATTCCATGGAAATCTGTCACAGAGACCTCAAGCTAGAAAACACATTGTTAGATGGAAGCCCAGCACCAAGACTTAAGATATGTGACTTTGGTTACTCAAAGTCTTCTGTTCTGCACTCTCAACCCAAATCTACAGTAGGAACACCTGCATATATTGCACCAGAAGTATTATCAAGAAAGGAATATGATGGGAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACTTTATATGTGATGCTTGTTGGAGCTTATCCTTTTGAAGATCCGGATGACCCAAGAAACTTCAGAAAAACACTTCAGAGAATCCTTAGCGTCCACTATTCTATTCCAGACTATGTTCGTGTTTCCCAAGAATGTAGACACCTTTTATCCAGAATATTTGTGGCCAACCCTGAAAAGAGAATTACAATTCCAGAAATAAAGAAGCATCCATGGTTTCTGTATAACTTGCCAATAGAATTCATGAACGAAGAAGGAGGGGAAAGTGGGATGGTGGAAATGGAAAGTGATGGGAATGAAAATGAAGGAAGTCAGAGCATAGAAGAAATACTGAGCATAATTCAAGAGGCTAGAAAACCAGGGGATGGTCCTAATAATAATAAACTTGGTGGAGGTCCCTTTGTTGATGGAAGCATGGATCTTGATGATATTGACGCAGATGCTGACATTGATGATGTTGAAACTAGTGGTGATTTTGTCTGTGCCATGTAG	1197	0.4077	MLSPISEGTSPSHSSLFSSFSSSSFQLDSPLKPKGNTAEDCSERNITTMERYEIIKDIGSGNFGVAKLVREKRTGEFFAVKFIERGSKIDEHVQREITNHRSLKHPNIIRFKEVLLTPTHLAIVMQYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTLQRILSVHYSIPDYVRVSQECRHLLSRIFVANPEKRITIPEIKKHPWFLYNLPIEFMNEEGGESGMVEMESDGNENEGSQSIEEILSIIQEARKPGDGPNNNKLGGGPFVDGSMDLDDIDADADIDDVETSGDFVCAM	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele22g1365	398	SUPERFAMILY	Protein kinase-like (PK-like)	44	312	IPR011009	-
	Lele22g1365	398	SMART	serkin_6	52	308	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele22g1365	398	Pfam	Protein kinase domain	52	308	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele22g1365	398	ProSitePatterns	Protein kinases ATP-binding region signature.	58	81	IPR017441	GO:0005524
	Lele22g1365	398	FunFam	Serine/threonine-protein kinase SRK2E	49	127	-	-
	Lele22g1365	398	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	167	179	IPR008271	GO:0004672\|GO:0006468
	Lele22g1365	398	Gene3D	Phosphorylase Kinase; domain 1	33	127	-	-
	Lele22g1365	398	ProSiteProfiles	Protein kinase domain profile.	52	308	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele22g1365	398	PANTHER	SERINE/THREONINE KINASE	50	328	-	-
	Lele22g1365	398	FunFam	Serine/threonine-protein kinase SRK2E	128	316	-	-
	Lele22g1365	398	CDD	STKc_SnRK2	51	307	-	-
	Lele22g1365	398	Gene3D	Transferase(Phosphotransferase) domain 1	128	313	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele22g1365	Lele-ChrLele22	19477471	19481062	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele22g1365	51	320	CBL-interacting serine-threonine protein kinases	AT4G24400	43.214	3.43e-70	225

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_OST1L	Lele22g1365		Pkinase	2.7e-72	CL0016