Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1355 ATGCTTCCCCGTTCTATCAGACAAACCCTCATCCAAAAATCCGATGCTCCTAACAAACAACGCTTTCCCCATTCCGTTTTGGGATTTTTCCGCCGCCACTTCTCTGCAAAGAAAGCTGATGGGGGCTCGAGGACGGAGGAAGAAGAAAGAGTTTACTCATGGTTATATGTTTTGGCTCGCTCTGAAAGAAACTTGGTCTTTGAGTACGTTCGTTCCACTGAAAGAGGTGGTTGCTCAATGAAGAAGTTATTTGGTTGGGTTCACGTAGGCTTAAGTTTCACTGAAGCAGAGAGGAGACTGAAGGAAAATGGACCAAATGTTCTGCATGAGCATACTTTTCCAAGCTGGGGGCATCTTCTATGGAGTGCACTTTTTCATCCTTTCAATATCATTCTGATTGTCTTGTCAAGCTTGTCCTTCATAACCAGAGATATTCCAAATGGTTGTATCATGCTCACACTTGTTTTTATCAGTGTCTCCCTTCGTTTCTATCAGGAGTACAGCAGTTCAAAAGCAGCCATGAAGCTTTCGGAATTTCTAAGATACCCAATAAAAGTTCAAAGATGTGCAGGCAGAGTTGTGCAACAAGAATTAGTAGTTCAGATTGATCAGAGGGATATAGTTCCTGGTGACATTGTGATTTTCGAACCTGGGGATCTCTTTCCTGGAGATGTCAGATTGTTATCTTCCAAAAATCTTGTTGTAAGCCAGTCCTCTCTAACTGGGGAATCATGGATAACTGATAAAACTGCCGATGTCAAAGAAAGTCTAAGCACTCCTCTGTTAGATTTAAAGAATATTTGTTTCATGGGCACAAACGTGGTATCTGGAAGTGGGACAGGCCTAGTTATATCAACTGGATCTGATACATACATGAACACCATGTTCTCAAAGATTGGGAAGAAGAAGCCACCAGATGAATTTGAATATGGCCTACGCTGGATTTTTTATGTGCTTGTGGCTATTATGCTAGTGGTAGTAACAGTCATATTTGTAACAGATTACTCTACCTCTGATGATTTGAGCACAAGTATTATTTTTGCCATCTCTGTGGCATCTGCCCTCACTCCTCAAATGCTTCCTCTCATCATCAACACTTGCCTTGCAAAAGGAGCACTCGCCATGGCTCGAGATAGATGCATAGTCAAAAGTTTAGCATCAATACGCAACATGGGATCGATGGATATCCTTTGTATTGACAAGACAGGTACACTGACAATGAACCGTGCCATTATGGTAAATCATCTTGACTTCCATGGGATAACGCAAGAGAAAGTTCTACGCTTTGCTTTCCTCAATTCTTACTTCAAGACAGATCAGAAGTATCCTCTGGATGATGCCATATTGGCTTTTGTATATTCAAATGGATTCAGATTTCAGCCCTCAAAATGGACGAAAATAGATGAGATTCCTTTTGATTTCATACGTAGGAGAGTATCTGTCATCATAGAAACAGAGTCGCATATTGAAGATGGACGGTCTCAGTTATTTGGCAGGTTCATGGTAACTAAAGGGGCATTGGAGGAAGTAATGAGAGTTTGTTCTTTCATTGAGAATTTCAATAACCATGAAGTTTCCAAGTTCTCAGCAGATGATTATAACAGAATTTTAGCCTTGGCAGAAGGATTGAGCAATGAGGGATTAAGAATTATAGGAGTAGCTATAAAGAAGCTAGAAATGCAAACCAGCGAAACGAGAACCGGAATTAGTAAGAGCATTGAAGAAAATGTTGAGACAGACATGGTGTTTCTTGGTATCATAACGTTCTATGACCCTCCCAAGGACTCAGCAGAGCAAGCCCTGTGGCGCTTAGCAGAGAAAGGAGTCAAAGCAAAAGTTTTGACAGGTGACTCCCTTTCCTTAGCCATGAGGGTATGCAGGGAAGTAGGAATCAGAACTACCCATGTAATCACGGGGCCTGAGCTCGACCGATTAGAACAAGAAGCTTTCCACGAAACTGTCAAAAGAGCCACAGTCCTAGCTAGGCTCACTCCAATTCAGAAACTGCGTGTAGTCCAGTCCTTACAGACAATGGGAAACCACGTTGTCGGGTTCTTGGGAGACGGTATTAACGATTCACTCGCCCTTGATGCTGCCAATGTAAGCATTTCAGTGGACTCAGGCGTAGCAATTGCCAAAGACATGGCAGACATCATACTGCTTGAGAAAGATCTTAATGTTCTTGTGGCAGGAGTAGAACATGGTAGACTCACATTTGGAAACACAATGAAGTACATTAAAACATCGGTTATCGCTAACTTAGGAAGCGTGCTTTCGCTGCTCATAGCGACTTTGGTGCTTAAATTTGAGCCGGTGACTTCAAGACAGCTTCTTACTCAGAATTTCCTGTATAGTGTAGGACAGATTGCTATTCCATGGGACAAAATGGAGGAAGATTATGTGAAGACACCTAAGAAATGGTCAGAGAGAGGATTACCAATGTTCATATTGTGGAATAATCCTGTGTGCACTCTTTGTGATGTTGGGGCTCTTTTGTTCATTTGGTACTATTACAAGGCTTATGGGGATCAAAAGTTTTGCCATTCAGCTTGGTTCGTTGAGGGGTTGATGATGCAGACTCTGATTATCCACTTGATTAGAACTGAGAAAATTCCATTTATACAGGACATAGCTTCATGGCCTGTGATTTGTTCCACTGTTGTCATTTCTTGTATTGGAATTGCACTTCCATTCACGCCCATTGGAGAAGTCATGGGACTCACGAGTTTACCTCTCTCGTATTTTGGGTTTTTGGTTGTTCTTTTCCTGGTTTACTTCACAATTGGCCAAGTGGTCAAGAGGCTTTACATATTGGTTTATAGAAGATGGCTTTGA 2835 0.4183 MLPRSIRQTLIQKSDAPNKQRFPHSVLGFFRRHFSAKKADGGSRTEEEERVYSWLYVLARSERNLVFEYVRSTERGGCSMKKLFGWVHVGLSFTEAERRLKENGPNVLHEHTFPSWGHLLWSALFHPFNIILIVLSSLSFITRDIPNGCIMLTLVFISVSLRFYQEYSSSKAAMKLSEFLRYPIKVQRCAGRVVQQELVVQIDQRDIVPGDIVIFEPGDLFPGDVRLLSSKNLVVSQSSLTGESWITDKTADVKESLSTPLLDLKNICFMGTNVVSGSGTGLVISTGSDTYMNTMFSKIGKKKPPDEFEYGLRWIFYVLVAIMLVVVTVIFVTDYSTSDDLSTSIIFAISVASALTPQMLPLIINTCLAKGALAMARDRCIVKSLASIRNMGSMDILCIDKTGTLTMNRAIMVNHLDFHGITQEKVLRFAFLNSYFKTDQKYPLDDAILAFVYSNGFRFQPSKWTKIDEIPFDFIRRRVSVIIETESHIEDGRSQLFGRFMVTKGALEEVMRVCSFIENFNNHEVSKFSADDYNRILALAEGLSNEGLRIIGVAIKKLEMQTSETRTGISKSIEENVETDMVFLGIITFYDPPKDSAEQALWRLAEKGVKAKVLTGDSLSLAMRVCREVGIRTTHVITGPELDRLEQEAFHETVKRATVLARLTPIQKLRVVQSLQTMGNHVVGFLGDGINDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYIKTSVIANLGSVLSLLIATLVLKFEPVTSRQLLTQNFLYSVGQIAIPWDKMEEDYVKTPKKWSERGLPMFILWNNPVCTLCDVGALLFIWYYYKAYGDQKFCHSAWFVEGLMMQTLIIHLIRTEKIPFIQDIASWPVICSTVVISCIGIALPFTPIGEVMGLTSLPLSYFGFLVVLFLVYFTIGQVVKRLYILVYRRWL 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1355 944 SUPERFAMILY HAD-like 577 734 IPR036412 -
Lele22g1355 944 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 79 943 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 SFLD p-type atpase 380 736 IPR044492 -
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 311 327 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 744 759 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 762 773 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 794 807 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 897 918 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 432 445 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 847 868 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 PRINTS Magnesium-transporting ATPase signature 814 830 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele22g1355 944 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 652 766 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g1355 944 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 151 442 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g1355 944 PANTHER CATION TRANSPORTING ATPASE 85 935 - -
Lele22g1355 944 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 392 593 IPR023299 GO:0000166
Lele22g1355 944 Pfam haloacid dehalogenase-like hydrolase 394 700 - -
Lele22g1355 944 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Lele22g1355 944 SUPERFAMILY Calcium ATPase, transduction domain A 192 297 IPR008250 -
Lele22g1355 944 Pfam Cation transporter/ATPase, N-terminus 90 139 IPR004014 -
Lele22g1355 944 SUPERFAMILY Calcium ATPase, transmembrane domain M 88 941 IPR023298 -
Lele22g1355 944 Gene3D - 410 590 IPR023299 GO:0000166
Lele22g1355 944 SFLD Haloacid Dehalogenase 380 736 - -
Lele22g1355 944 Pfam E1-E2 ATPase 192 377 - -
Lele22g1355 944 SMART Cation_ATPase_N_a_2 57 144 IPR004014 -
Lele22g1355 944 Gene3D - 146 895 - -
Lele22g1355 944 Gene3D - 395 723 IPR023214 -
Lele22g1355 944 Gene3D - 182 286 - -
Lele22g1355 944 Pfam Cation transporting ATPase, C-terminus 770 935 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1355 Lele-ChrLele22 19342547 19346763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1355 150 841 Primary Pumps ATPases(2) AT1G07810 24.749 9.31e-54 201