Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1351 ATGTATCGTTGTGAACGAGGACAGAGTAAGCGGTCTGTACTCTGTTCAATTGCTGTAACGGAGCCAAAAGTAGAGAGAAATAGGGAAGATGAGTTTGTGATGAAAGGCACAAATGAGGTTAAGCCGCAAAGGAGGGAACATGGGAAGGCCTCAGAAGTGAAAGATATGAGAATGAGGCATGCCAAAACGTCCATTGATTTTTCTTCACATTACAATACGAATGGAAGATGCACTTTCCCTGCTATGCACGTGCGTCACATTGAAGCCCTGTCCCTACCCACCCTGAGAACAAGAAGAACAAGAACAATCATGGGTCTCTCAAATATCCCTAATTTATCTGAAGGGGTACTTCCTGCACTTGTGGTGAACACAGTTCTATCAGTGGTTCTTCTCAAGAACATGCTGAGATCTGTGCTGGAAGCCGTTGGCGTGACATCCTCGTCGTCATCAACATCGTCACCGTATTCTCAGAATATGGAGGAAGATTCAGATGAAGAAACAGAGCGAGAGAGTTGGAGAAGAAGGAGGGTGTCAATAACACAGTACAAGATTTGCAGTGGAACAGCACCATCAACAACAACAACAACAACAACAAGTGACTCTGGTTCGAGTGTTGGAGGATTATCGGGTACGGTGGAGTGCTGCGTTTGTTTGTGTGGGTTCGAATCGAATCAGGAGGTGAGTGAATTGCCCTGCAAACATTTCTTCCACAGAGCTTGCTTAGACAAGTGGTTCGATAACAAGCACTTAACTTGCCCTCTATGTCGTTCCATAGATTGA 780 0.4513 MYRCERGQSKRSVLCSIAVTEPKVERNREDEFVMKGTNEVKPQRREHGKASEVKDMRMRHAKTSIDFSSHYNTNGRCTFPAMHVRHIEALSLPTLRTRRTRTIMGLSNIPNLSEGVLPALVVNTVLSVVLLKNMLRSVLEAVGVTSSSSSTSSPYSQNMEEDSDEETERESWRRRRVSITQYKICSGTAPSTTTTTTTSDSGSSVGGLSGTVECCVCLCGFESNQEVSELPCKHFFHRACLDKWFDNKHLTCPLCRSID 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1351 259 PANTHER - 104 257 IPR044249 -
Lele22g1351 259 MobiDBLite consensus disorder prediction 146 173 - -
Lele22g1351 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 258 IPR013083 -
Lele22g1351 259 ProSiteProfiles Zinc finger RING-type profile. 214 256 IPR001841 -
Lele22g1351 259 SMART ringv_2 213 256 IPR011016 GO:0008270
Lele22g1351 259 Pfam Ring finger domain 213 256 IPR001841 -
Lele22g1351 259 SMART ring_2 214 255 IPR001841 -
Lele22g1351 259 SUPERFAMILY RING/U-box 213 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1351 Lele-ChrLele22 19317603 19320047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1351 104 257 C3H Transcription Factor Family AT2G04240 32.727 5.19e-19 79.7