Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1348 ATGTCTAAACCATGGGGTGGTGCTGGAGCTTGGGCCGCCGAGGCCGAGCGTGCTGAGGCCGAAGAGCGTGAGCAAGCGACTGCAGCTGGCGCTTCGGGATCCCAGAACTTCCCCAGCCTGAAGGAGGCTGTGAATACGAAGCCCAAGAAGAAGAAAATGTCTATGGCGGAGTTTAATCGTATTTCCACTGCCGGCGGAGGTGGCATCGCCACTGAGTATAAGGGTCTGACGCAGGATGAGATGCTTCGGCTCCCTACGGGCCCGAAGGATCGTTCTGCCGATGAAATGCAGTATAGTCGTGGTTTCTCCTCTTACGGGCGTTCTGGTCCGCCGCAAGGACGCATGAGAGACCGTGACGACAATGATGGCTCTTGGGGTGGAGGAAGAAGATCCTATGGAGGATTTGATGAAGAACGTAGGGGTCCCCCTTCTAGGGTTTCGGATTACGAGCAGCCATCCAGGGCAGACGAGGATGATAATTGGGGCGCGGTTAAAAAATCTCTTCCATTGTTCGATTCAGGTCGGCAAAATCGCTATAGTTCGCTGGGTGGTGGTTCCAGGGCCGATGAGAAGGATAACTGGTCAGTTGGTAAAAAGCCTTTTCCTGCTAGATCTCCCGCATTTGGTTCTGGGTTTCGCGATTCGGGTGTGGAGCCTGACCGCTGGACGAGGGGAACACCGCGCGATAACGAGCGGGAGCGTCCCAGATTGGTATTGGATCCGCCAAAAGGTAATGCCCCTGTTAATGAACCGGTCAAGACAAATAAGGCGAATCCATTTGGCGCAGCTAGGCCCAGGGAAGAAGTTTTGGCTGAGAAGGGTGTGGATTGGAAGAAGGTGGACTCTGAAATTGAAGCTAAGAAGACAAGTAGGCCTTCAAGTTCGCACTCTATCAGGCCATCCAGTGCTCAATCTAGTCGTTCTGAGGATACAGCGTCGCAGGAGCCAGAAACCATTGTAAAGCCCAGACCAAAAGTGAATCCATTTGGGGATGCAAAACCCCGAGAAGTATTGCTGGAGGAGCGAGGTAAAGATTGGCGGAAGATTGATCTAGAATTGGAGCATCGCGGTGTTGACAGGCCAGAAACTATGGAGGAAAAGTTATTGAAAGAAGAAATTGATAATTTGAAGAAGGAGCTTGAGAAAGATTTAACATTAAATTCAAGGAAGGAATCTGTGGAAGAGGCTGGAGGAGGCCAAAGTAGCCTACAAGAAACTTTACTTCAGAAGGAAAGGGAGCTGGAGTCTCTTATTCGTGATTTGGATGACAAAGTTCGTTTTGGGCAAAAAGCTATTGAAAGGCCTGGCTCTGGAGCAGGAAGGCCTGGTTCTGGAGCAGGAAGGCCAGGTTCTGGGGGAGGAAGGCCAGGTTCTGGAGCGGGAAGGGCTGCTGGTTTTCCTGATAGGCCACATTCTCAGTCTGGCTCATTTGAAGATTCTAGGAGTGTGGAATTCACAGGCAGACCTCCATCCCGAGGCACAGGAGATGTGTGGACACGGCCTGATGACAGAAGACCATTTCAAGGTGCCAGGGACAGAGGGTTTCCAAATAGCCGGGTCTTGGATGGGTCAAGATCGAGAGAGAGATGGTGA 1593 0.5173 MSKPWGGAGAWAAEAERAEAEEREQATAAGASGSQNFPSLKEAVNTKPKKKKMSMAEFNRISTAGGGGIATEYKGLTQDEMLRLPTGPKDRSADEMQYSRGFSSYGRSGPPQGRMRDRDDNDGSWGGGRRSYGGFDEERRGPPSRVSDYEQPSRADEDDNWGAVKKSLPLFDSGRQNRYSSLGGGSRADEKDNWSVGKKPFPARSPAFGSGFRDSGVEPDRWTRGTPRDNERERPRLVLDPPKGNAPVNEPVKTNKANPFGAARPREEVLAEKGVDWKKVDSEIEAKKTSRPSSSHSIRPSSAQSSRSEDTASQEPETIVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLELEHRGVDRPETMEEKLLKEEIDNLKKELEKDLTLNSRKESVEEAGGGQSSLQETLLQKERELESLIRDLDDKVRFGQKAIERPGSGAGRPGSGAGRPGSGGGRPGSGAGRAAGFPDRPHSQSGSFEDSRSVEFTGRPPSRGTGDVWTRPDDRRPFQGARDRGFPNSRVLDGSRSRERW 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1348 530 Coils Coil 366 386 - -
Lele22g1348 530 MobiDBLite consensus disorder prediction 424 530 - -
Lele22g1348 530 MobiDBLite consensus disorder prediction 293 315 - -
Lele22g1348 530 MobiDBLite consensus disorder prediction 28 42 - -
Lele22g1348 530 MobiDBLite consensus disorder prediction 382 407 - -
Lele22g1348 530 MobiDBLite consensus disorder prediction 1 336 - -
Lele22g1348 530 MobiDBLite consensus disorder prediction 266 292 - -
Lele22g1348 530 Coils Coil 400 424 - -
Lele22g1348 530 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 530 IPR010433 GO:0003743
Lele22g1348 530 MobiDBLite consensus disorder prediction 132 163 - -
Lele22g1348 530 MobiDBLite consensus disorder prediction 217 239 - -
Lele22g1348 530 Pfam Plant specific eukaryotic initiation factor 4B 1 454 IPR010433 GO:0003743
Lele22g1348 530 Pfam Plant specific eukaryotic initiation factor 4B 455 514 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1348 Lele-ChrLele22 19281581 19286784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1348 1 530 Eukaryotic Initiation Factors Gene Family AT3G26400 49.741 1.88e-137 406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1348 22 19281581 19286784 Lele22g1348 22 19281581 19286784 ECH
Lele22g1348 22 19281581 19286784 Lele23g0668 23 5156421 5162154 hybridization
Lele22g1348 22 19281581 19286784 Lele24g1307 24 19079886 19085120 hybridization