Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1333 ATGGCAATTCCATTCTCATTCACATTTCTCCTCCTACTTCTGGCTCCTTTCTTCATTTTATCTTCCCCTCTTCAAGATCCAGAATTAGTTGTCGAACAAGTACACAAGAGCATCAATGCGTCGAGAAGAAACCTGGGGTTTCTTTCTTGTGGAACCGGGAACCCCATTGATGATTGTTGGGGGTGTGATCGCAACTGGGGAAATAACAGAAAGCGTCTCGCAGATTGCGGCATTGGGTTCGGCAAGAACGCCATCGGAGGCAGAGACGGCAGATTCTACGTCGTCACCGACCCCGGCGACCACCCTGTGAATCCCAAGCCAGGAACATACGGCGTTATACAGAACGAACCACTTTGGATCATCTTCAAAAAAGACATGGTGATCAAGCTCAAACAAGAGCTTCTGATGAACTCCTTCAAGACCATCGATGGCAGAGGAGCCAATGTTCACATAGCAGGTGGCTTAGTCCAGAGATTGCCAAGACATGGGTACTTCCATGTAGTGAATAATGATTACACTCATTGGAGAATGTATACAATAGGAGGGAGTGCAAATCCAACTATAAACAGTCAAGGAAACATTTCCTTGCTCCTAATGATGGTGACTAAGAGGGAGGATACACCGGAGAGCGTATGGAAGAAGTGGAATTGGAGATCTTCAGGGGATGAGATGTTAAACGGTGCGTTTTTCACGGCGTCTGGGAAGGGATCATCTTCGAGCTATGCTCGAGCTTCGAGCTTGTCTGCGAAACCATATTCACTGGTTAGTTCTGTAACAGCAGCAGCCGGAGCACTTCAATGCAGAAAGGACTCACGTTGTTGA 822 0.472 MAIPFSFTFLLLLLAPFFILSSPLQDPELVVEQVHKSINASRRNLGFLSCGTGNPIDDCWGCDRNWGNNRKRLADCGIGFGKNAIGGRDGRFYVVTDPGDHPVNPKPGTYGVIQNEPLWIIFKKDMVIKLKQELLMNSFKTIDGRGANVHIAGGLVQRLPRHGYFHVVNNDYTHWRMYTIGGSANPTINSQGNISLLLMMVTKREDTPESVWKKWNWRSSGDEMLNGAFFTASGKGSSSSYARASSLSAKPYSLVSSVTAAAGALQCRKDSRC 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1333 273 PRINTS Pollen allergen Amb family signature 76 93 IPR018082 -
Lele22g1333 273 PRINTS Pollen allergen Amb family signature 133 149 IPR018082 -
Lele22g1333 273 SUPERFAMILY Pectin lyase-like 154 267 IPR011050 -
Lele22g1333 273 SUPERFAMILY Pectin lyase-like 39 156 IPR011050 -
Lele22g1333 273 Gene3D - 156 266 IPR012334 -
Lele22g1333 273 Gene3D - 53 155 IPR012334 -
Lele22g1333 273 PANTHER PECTATE LYASE 18-RELATED 25 154 IPR045032 GO:0030570
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele22g1333 Lele-ChrLele22 19120041 19121482 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1333 150 273 Polysaccharide Lyase AT5G63180 63.158 2.21e-41 145