Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1321 ATGGGTGTATTTTCTCTTATGATTATACTTATATTTTGTCTTTTAATTTCATCTGCAGTATGCCAAGTTCAAGAGTTCATCAGCATAGACTGTGGAGGCACTGGTAATTACACTGATAAAAGCACAGGATTGGCATGGATTTCAGACAATGGGATTATGAACCATGGCACTCAAGTAGATGTAGAAGGTGCAAATGGAAACAGGATACAGTATCAGAAACGCAGAGACTTCCCCATAGACAACAGGAAATACTGTTACACACTAAACACCGACGAGAGAAGAAGATACCTGGTGCGAGCAACGTTTCAGTATGGAAACTTGAAAAGTGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACTAAATGGGCCACTGTGTCAATATATGATGCCTCAAGAGTTTATATGAAGGAAATGATTATTAGGGCCCCCTCAAGCTCTACTGATGTGTGCTTGTGTTGTGCTACCACTGGTTCACCATTCATATCAACTCTAGAGCTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAAGATAATTTCTTCTTAAAAGTTGCTGCAAGAATCAATTTTGGCGCTTCAAGTGAGGATGCTATCAGGTACCCGGATGACCCGTATGATAGAATTTGGGAATCAGATCTTGTTAAAAGGCAAAACTATCTTGTTGGGGTGGCCCCAGGCACAGAAAGGATTAATACAACAAAGAACATAGAGATAGGAAGTAGAGAATACCCACCTGTCAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGGGTACTCAGCTACAGAACTAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCTTACTTTGCGGAGATTGAAGATCTGGGTAACAATGAGACTAGAAAATTCAAAATGGAGCAACCTTTTATACCTGATTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAATGGGAGCTACACTCTATATGAACCTAGTTACATGAATGTGACTCTGGAATTTGTTCTGTCATTCTCGTTCGTTAAGACCCGGGATTCTACTCGAGGGCCACTTCTAAATGCAATGGAAATAAGCAAATACCAACTGATTGCTCCAAAGACTGACAAGCAAGATTTGACTGTTGTAAATGAATTCTCCTCCATGTCTGCTGAAAGTGTCCAGAAGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGCAGTGGGTAAATTGTAGTGCTGCCACATTTCCAAGAATCACAAAAATAAAACTGTCAAGAAGGAATGTTACGGGCACAATCCCATCTGACATCAACAACATGGAAGAATTGACAGAATTGTGGTTGGATGGAAACTTCATTACAGGGCCACTGCCTGACATGAGCAATCTTATCAATTTAAAGATTGTGCATCTAGAGAACAACCAATTGAGTGGTCCATTACCATCTTACCTGGGTAGTTTGCCAAGCTTAGAAGCACTCATTTTGTCAAACTGTGACAGGTTCATACAAAATAACTCGTTTACTGGGGAAATACCAGCAGGATTAGCATCTGGAAAAATCATTTTCAACTATGATGGTAATCCTGGACTACATAAAGGGACCAAGAAACACTTCAAGTTGATACTGGGAATTTCAATAGGAGTTCTTGTCATTCTAGCAATATTATTTTTAGGAAGTTTGATGCTAATACATAATCTTCGAAAGGCATCCCAACAGAAATGTAATGAGAATGGTATCTCTGGACGCAGCATGACCAAACCTATAGGTCCATACTCACTGGTTCGGGGAGGGAGTCTAATGGATGAAGGCATTGCATGCTATATTGGGCTCTCAGACTTGAAAGAAGCTACTGATAATTACGCAAAGAAAATCGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAAAGATGGAAAAGAAGTGGCTGTTAAAATTATGAGTGATTCATGTACCCATGGGAACCATCAATTTGTGACTGAGGTAGCCCTTCTGTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTAACCGTATTTTGGTTTACGAGTATATGCACAATGGCACCTTGCGGGACCACATTCATGGTTCCTCAAAGCAGAAAAACTTAGACTGGTTAGTTCGTCTTCGTATAGCAGAAGATGCAGCGAAAGGTCTTGAATACTTACATTCAGGATGCAATCCGAGCATCTTACACCGAGACGTGAAGACCAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGATTAGCTGAAGAAGATTTAACTCATGTATCAAGTATTGCCAGGGGAACTGTAGGTTACTTGGATCCTGAGTACTATGCAACTCAGCAATTGACAGAGAAGAGTGACGTATACAGCTTTGGAGTTGTACTTCTTGAACTCATCGCCGGAAGAAAGCCTGTATCATCAGAAGATTACGGTGCCGAAATGAATATTGTTCACTGGGCAAGGTCGTTAATTCGCAAAGGCGATGTGGTGAGCATAATGGATCCATGTTTAGTAGGGAACGTGAAAACGGAATCGATTTGGAGGGTTGCGGAAATCGCAATGCAATGCGTAGAACAACACGGGGCGTGCAGGCCGAGGATGCAAGAGATCATACTGGCGATACAAGAAGCAATCAACATTGAGAAAGGAACAAACAGTAACATGAAATTATCATCCTCAGGTAGTTCGAAAGCTCAATGTTCGAGAAAAACTTTACTCACAAGCTTTCTCGAAATTGAGAGCCCTGACTTGTCCAATGGTTGCCTCCCTACTGCAAGATAA 2811 0.412 MGVFSLMIILIFCLLISSAVCQVQEFISIDCGGTGNYTDKSTGLAWISDNGIMNHGTQVDVEGANGNRIQYQKRRDFPIDNRKYCYTLNTDERRRYLVRATFQYGNLKSGDTYPQFQLYLDATKWATVSIYDASRVYMKEMIIRAPSSSTDVCLCCATTGSPFISTLELRPLNLSMYATDFEDNFFLKVAARINFGASSEDAIRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTKNIEIGSREYPPVKVMQTAVVGTKGVLSYRTNLEDFPANARAYAYFAEIEDLGNNETRKFKMEQPFIPDYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVKTRDSTRGPLLNAMEISKYQLIAPKTDKQDLTVVNEFSSMSAESVQKNEGDPCVPTPWQWVNCSAATFPRITKIKLSRRNVTGTIPSDINNMEELTELWLDGNFITGPLPDMSNLINLKIVHLENNQLSGPLPSYLGSLPSLEALILSNCDRFIQNNSFTGEIPAGLASGKIIFNYDGNPGLHKGTKKHFKLILGISIGVLVILAILFLGSLMLIHNLRKASQQKCNENGISGRSMTKPIGPYSLVRGGSLMDEGIACYIGLSDLKEATDNYAKKIGKGSFGSVYYGKMKDGKEVAVKIMSDSCTHGNHQFVTEVALLSRIHHRNLVPLIGYCEEECNRILVYEYMHNGTLRDHIHGSSKQKNLDWLVRLRIAEDAAKGLEYLHSGCNPSILHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHVSSIARGTVGYLDPEYYATQQLTEKSDVYSFGVVLLELIAGRKPVSSEDYGAEMNIVHWARSLIRKGDVVSIMDPCLVGNVKTESIWRVAEIAMQCVEQHGACRPRMQEIILAIQEAINIEKGTNSNMKLSSSGSSKAQCSRKTLLTSFLEIESPDLSNGCLPTAR 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1321 936 FunFam serine/threonine-protein kinase PBS1-like 594 689 - -
Lele22g1321 936 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Lele22g1321 936 Pfam Protein tyrosine and serine/threonine kinase 617 881 IPR001245 GO:0004672|GO:0006468
Lele22g1321 936 ProSiteProfiles Protein kinase domain profile. 614 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1321 936 SUPERFAMILY Protein kinase-like (PK-like) 605 882 IPR011009 -
Lele22g1321 936 Gene3D Transferase(Phosphotransferase) domain 1 690 909 - -
Lele22g1321 936 FunFam Leucine-rich repeat receptor-like kinase 372 479 - -
Lele22g1321 936 SUPERFAMILY L domain-like 398 512 - -
Lele22g1321 936 Gene3D Phosphorylase Kinase; domain 1 599 689 - -
Lele22g1321 936 Pfam Malectin-like domain 29 362 IPR024788 -
Lele22g1321 936 CDD STKc_IRAK 620 881 - -
Lele22g1321 936 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 690 897 - -
Lele22g1321 936 Gene3D Ribonuclease Inhibitor 370 523 IPR032675 -
Lele22g1321 936 SMART serkin_6 614 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1321 936 PANTHER OS07G0107800 PROTEIN-RELATED 27 888 - -
Lele22g1321 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1321 Lele-ChrLele22 18925870 18930796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1321 1 936 Receptor kinase-like Gene Family AT1G67720 68.158 0.0 1288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele22g1321 Malectin_like 3.8e-89 CL0202