Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1312 ATGGCTCTTGCTGTTGATACTCCATTGGGTGTTCTCAATGCTGCATTCTTCATCGCTATTTTGATATGGGTTTTGGTTGATAGTTTGAGAGAAAGTAGGCGTAACGATGTTTTATATTTGAAACACGTACCGAAACGATTCGCCGTTTTCTCCAGAATCACGCTTGTGTTTCATGTTATTATTTCGGTTTTGAACTTCGCTTTTGCGTTTCATGAATATTGGACGGAGAAAATCGTGTCGTATTACGCTGTTTCTTTGGCTCTTACTTGGGTTTTAGCGACCTTGGTTTCCGTGTACTCCGTGAAAAGAATAAGCCGCCAAAACAAAACGTGGCCTCTCGTTTTGATTCTCTGGTGGTTCTTCACCACTGTATTGGATTTGATTTTCGTTTCTACGAAATTCGTCAAGAACTTCAAATCCTTGGATTTGTCTTTCTTTCTGTTAGAGGAAAACGTGGTGGATTTCGTTTCCTTTCCTCTTCTGTTACTTCTCTGGTTCAATGCTCTGCCTTCTGTTTGGACGAGCAATTGTAGTGAATCAGAACAAGTGTTGCTTCAAAAGAACGAAGACGAAGACGAAGATGAAGAAGATAAAGAAGCATTCATAAATGCTGGAATATGGAGCAAGCTCACGTTTCAATGGCTGAATCCTATTTTCAGGAGAGGTCAGATTCAGAAACTTGAACTTGCCCATATTCCTTCAGTTCCTCAATCTGAAACTGCAGAATATGCTTATTCCATGCTCGAAGATTCACCCCGAAAACGTAAACTCGAAAACGGTTCATTGGCGAATGCTATTGCTCACTCTATCTGGAAATCCTTGACCTTGAATGCAGTTTTCGCAGGCGTTAACACATTGGCCTCTTACATGGGTCCCTTGTTGATCACAAACTTCGTGAATTTCTTGTCGGGAGATTATAATGATTCAAGCATCCACTACGGGCTAATTCTTGCGTTCATTTTCTTCCTGGCGAAGACTCTGGAATCGCTGACTCAAAGACAATGGTACTTTGGAGCTCAACGAATAGGAATTCAAGTCCGTGCAGCTCTCACGGGTTTGATATACATCAAATCACTCTCAATCAAGTGTGATGGACCAACAAATGGTAAAACCATAAACTTAATCAATGTGGATGTTGAAAGGATTGGAGATTTCTGCTGGTACATTCATGGAGTATGGTTACTTCCAGTTCAGGTTGTGTTGGCCTTGGTTATCTTGTACAGGAATTTAGGATTCGCACCCTCCATTGCTGCATTTGCTGTTACTGTTTTGGTCATGGTTTGCAACACTCCCATGGCTAATATGCAGGAAAGTCTTCACTCCAAGATTATGGAAGCTAAGGATTCGAGGATTAAAGCGACTTCAGAGATTCTAAAGAACGTGAGAATTTTGAAATTACATTCATGGGAATCCACATTTCTGAAGAAGCTTCATCAGCTTAGGGAAACTGAGAAGAACTGGCTTAAGAAATATCTGTATACTTGCTCAGCAGTGACATTTCTGTTTTGGACATCACCAACTCTTATTTCTGTGGTCACTTTTGGTGTCTGTATATTGGTGAAAACAGAATTAACAGCAGCCGCAGTGCTGTCAGCTTTAGCAACTTTTCGTATCTTACAAGAACCAATCTACAACTTACCTGAGCTTGTTTCCATGATAGCTCAAACGAAAGTGTCCATTGATCGGATCCAAGAGTTCATTAAAGAAGAGGATCAAATGCAGTTCATGACTAAGCCTACGTTGAAAACTTCTGATGTTGCCATTGAAATTAAAACTGGTGAATACTCATGGGAAGCTGATGATCAATACTACAAGAAACCAACTATTCAAATTACAGAGAAGTTGAAGATAGAGAAAGGTCAAAAGGTTGCAATATGTGGGTCGGTGGGGTCTGGCAAATCAAGCCTGTTATGCTGTATGCTTGGTGAGATTCCGAGGATTTCAGGGGAAGGAATTAAAGTATATGGAAATAAAAGTTATGTGCCCCAAAGTCCTTGGATTCAATCGGGGACTATAAGAGAAAATATACTATTTGGCAGAAAAATGAAAGTGGAATTGTACGAGAATGTCCTGGAATGCTGTGCATTGCGCCAGGATATCAACCAGTGGGAAGATGGAGATTTGACCATGGTGGGGGAGAGGGGCATAAACTTAAGTGGAGGCCAAAAACAGAGAATTCAACTGGCAAGAGCTGTTTACAATGATTCAGATATTTATTTCCTAGATGACCCTTTCAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTTAAGAAATGTCTCTTACAACTTCTATCTGAGAAAACAGTTGTTTATGCTACCCATCAACTGGAATTTTTGGAAGCTGCTGACCTTGTCTTGGTAATGAAAGATGGAAAAATAGTTGGGTCAGGAAAGTATAAAGATCTGATAGCATGTCACACTTGTGAACTTGTTGATCAAATGGCTGCTCATAAGGAAACTATAAAGCAAATTAGACCATGCCGTGAGGATAAATCCTTATCCAAGAACTGTACACCATGTCGGATACAACAAATTGAAGTATCTGAAACAAATCTTGCTATGAACCTTGAAGAAAACAGGAAACATTTGGAGAGAAGCAAAGAAGAGAAAGCAGAGACGGGTCGAGTTGATTGGAGTGTTTACTCAACCTTTGTCACGTTTTCTTATAAAGGCGCATTTGTTCCCGTTATTCTCCTATGCCAAATTATCTTTCAAGGAATGCAAATGGGAAGCAATTATTGGATTGCTTGGGCTGCAGAACAGAGAGCCAGTGTTAGTAAAGGGACGCTTATTGGGACCTTTGTTCTGCTATCTGGTGGCAGTTCCATCTTCATACTTGGAAGGGCTGTTTTCATGGCAAAAATTGCTGTAGAGACAGCTCAACGTCTGTATCATGAAATGATCACATCAGTTTTCAGAGCTCCTGTTTCCTTTTTTGATACCACCCCTTCAAGCAGAATCTTGAATAGGTGTTCCACAGATCAAAGTACAGTGGACACAGATATACCATACAGACTAGCTGGACTTGTATTTGCACTTATCCAGTTATTGAGTATCATCATTCTAATGTCCCAGGTTGCTTGGCAAGTCATTCTTTTCTTTGTTGTCGTGCTTGCGATCTCCATCTGGTATCAGGCTTATTACATTACTACTGCTAGAGAATTGGCTAGGATGGTAGGGATCAGGAAGGCTCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGTGTGGCCACAATCCGTTGTTTCAATCAACAGCAAAGATTTTATAGGAAAGTTATGGCTCTAATTGATGATTATTCTCGTGTGGCATTTCATAATTATGCCACCATGGAATGGTTATCCGTTAGAATAAACTTTCTCTTTAATCTAGTCTTCTTTTTCGTTCTCATCATCTTGCTTACACTGCCAAGGTCTGCCATTGATCCTAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAGTGTTCTTCAGGCTTGGGTGATATGGAACCTCTGCAATGTGGAAAACAAAATGATATCTGTTGAGAGAATACTCCAATTCACAAAGATACCGAGTGAGGCGCCCCTGATAATTCAAGATTGTAGGCCACAACTGGAGTGGCCAAGGGAGGGGAAGATTGAGCTTCAGAATCTTCACATACAGTATGATCCTGCAGCTCCTATGGTTCTGAAAGGTGTCACTTGCACCTTTCCAGGACACAAGAAGATTGGAGTTGTAGGGAGGACAGGAAGTGGAAAATCTACGTTAGTGCAAGCGCTCTTCCGAGTGGTAGAACCTTCAGTAGGAAGGATACTAATTGATTGTGTAGATATCTGCAAGATTGGCCTAAAGGATCTAAGATCCAGGCTTGGGATAATTCCTCAGGATCCTACCTTGTTTCAAGGTACTGTAAGGAATAACTTGGATCCTCTGGAACAACACTCAGACCAAGAACTTTGGGAGGTTCTTGGTAAGTGCCATCTTGCTGATATAGTTAGGAAGGATCCAAGGCTTCTTGATGCATCAGTGGCTGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGTCTGGCCAGACTGCTATTGAAGAAAAGAAGAATTTTGGTTCTTGATGAAGCTACTGCATCGATTGACACGGGGACCGATAATTTAATTCAAAAGACTATTAGAGAAGAGACAAGCGAATGCACAGTCATCACAGTGGCCCATAGGATTCCTACAGTTATTGATAATGACCTTGTATTGGTCCTCGACGAAGGGAGGATTGCAGAGTTTGATGACCCAGCTAAGTTGCTAGAGAACAATTCATCATCATTCTCAAAGCTAGTTTCAGAATTTTTGAGGAGATCAACTGATCAAAGTGATTATCAAAGGGACACAAGAATGTGA 4389 0.4099 MALAVDTPLGVLNAAFFIAILIWVLVDSLRESRRNDVLYLKHVPKRFAVFSRITLVFHVIISVLNFAFAFHEYWTEKIVSYYAVSLALTWVLATLVSVYSVKRISRQNKTWPLVLILWWFFTTVLDLIFVSTKFVKNFKSLDLSFFLLEENVVDFVSFPLLLLLWFNALPSVWTSNCSESEQVLLQKNEDEDEDEEDKEAFINAGIWSKLTFQWLNPIFRRGQIQKLELAHIPSVPQSETAEYAYSMLEDSPRKRKLENGSLANAIAHSIWKSLTLNAVFAGVNTLASYMGPLLITNFVNFLSGDYNDSSIHYGLILAFIFFLAKTLESLTQRQWYFGAQRIGIQVRAALTGLIYIKSLSIKCDGPTNGKTINLINVDVERIGDFCWYIHGVWLLPVQVVLALVILYRNLGFAPSIAAFAVTVLVMVCNTPMANMQESLHSKIMEAKDSRIKATSEILKNVRILKLHSWESTFLKKLHQLRETEKNWLKKYLYTCSAVTFLFWTSPTLISVVTFGVCILVKTELTAAAVLSALATFRILQEPIYNLPELVSMIAQTKVSIDRIQEFIKEEDQMQFMTKPTLKTSDVAIEIKTGEYSWEADDQYYKKPTIQITEKLKIEKGQKVAICGSVGSGKSSLLCCMLGEIPRISGEGIKVYGNKSYVPQSPWIQSGTIRENILFGRKMKVELYENVLECCALRQDINQWEDGDLTMVGERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLLQLLSEKTVVYATHQLEFLEAADLVLVMKDGKIVGSGKYKDLIACHTCELVDQMAAHKETIKQIRPCREDKSLSKNCTPCRIQQIEVSETNLAMNLEENRKHLERSKEEKAETGRVDWSVYSTFVTFSYKGAFVPVILLCQIIFQGMQMGSNYWIAWAAEQRASVSKGTLIGTFVLLSGGSSIFILGRAVFMAKIAVETAQRLYHEMITSVFRAPVSFFDTTPSSRILNRCSTDQSTVDTDIPYRLAGLVFALIQLLSIIILMSQVAWQVILFFVVVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGVATIRCFNQQQRFYRKVMALIDDYSRVAFHNYATMEWLSVRINFLFNLVFFFVLIILLTLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLIIQDCRPQLEWPREGKIELQNLHIQYDPAAPMVLKGVTCTFPGHKKIGVVGRTGSGKSTLVQALFRVVEPSVGRILIDCVDICKIGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLEQHSDQELWEVLGKCHLADIVRKDPRLLDASVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTGTDNLIQKTIREETSECTVITVAHRIPTVIDNDLVLVLDEGRIAEFDDPAKLLENNSSSFSKLVSEFLRRSTDQSDYQRDTRM 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1312 1462 SUPERFAMILY ABC transporter transmembrane region 268 570 IPR036640 GO:0005524|GO:0016020
Lele22g1312 1462 Coils Coil 854 874 - -
Lele22g1312 1462 CDD ABC_6TM_ABCC_D2 895 1185 IPR044726 GO:0140359
Lele22g1312 1462 Gene3D ABC transporter type 1, transmembrane domain 857 1191 IPR036640 GO:0005524|GO:0016020
Lele22g1312 1462 Gene3D ABC transporter type 1, transmembrane domain 262 572 IPR036640 GO:0005524|GO:0016020
Lele22g1312 1462 CDD ABC_6TM_ABCC_D1 276 563 IPR044746 GO:0140359
Lele22g1312 1462 CDD ABCC_MRP_domain1 588 793 - -
Lele22g1312 1462 SMART AAA_5 1236 1427 IPR003593 -
Lele22g1312 1462 SMART AAA_5 619 793 IPR003593 -
Lele22g1312 1462 FunFam ABC transporter C family member 5 858 1191 - -
Lele22g1312 1462 Gene3D - 1193 1446 IPR027417 -
Lele22g1312 1462 Pfam ABC transporter transmembrane region 275 542 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g1312 1462 Pfam ABC transporter transmembrane region 913 1136 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g1312 1462 Gene3D - 610 839 IPR027417 -
Lele22g1312 1462 CDD ABCC_MRP_domain2 1208 1428 - -
Lele22g1312 1462 FunFam ABC transporter C family member 10 258 571 - -
Lele22g1312 1462 Pfam ABC transporter 1227 1375 IPR003439 GO:0005524
Lele22g1312 1462 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 278 555 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g1312 1462 Pfam ABC transporter 614 745 IPR003439 GO:0005524
Lele22g1312 1462 FunFam Multidrug resistance-associated protein 4 573 833 - -
Lele22g1312 1462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 806 IPR027417 -
Lele22g1312 1462 FunFam ABC transporter C family member 3 1193 1445 - -
Lele22g1312 1462 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1210 1444 IPR003439 GO:0005524
Lele22g1312 1462 SUPERFAMILY ABC transporter transmembrane region 897 1192 IPR036640 GO:0005524|GO:0016020
Lele22g1312 1462 ProSitePatterns ABC transporters family signature. 718 732 IPR017871 GO:0005524|GO:0016887
Lele22g1312 1462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1202 1436 IPR027417 -
Lele22g1312 1462 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 897 1173 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g1312 1462 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 203 1448 - -
Lele22g1312 1462 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 581 816 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1312 Lele-ChrLele22 18605737 18611895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1312 578 843 Calmodulin-binding Proteins AT2G36910 29.452 1.19e-21 100