Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1303 ATGTGGAAGTTCAAAGCATCATCATATACTGCAAATTTCAGTTATCATAGCAGTATCCCTGCAAAGGAGCGTAGCTATGTACAGGAGTTGTTTGGTTCCAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGTCATGGGATTAGACAAAAGGGATGTTGGAGCTGTAATTCATTACAGTCTACCAGAAAGTCCTGAGCATTATGAGATTGGACGGGCTGGAAGGGATGGGAGGTTGTCCTTTTGCCACCTATTTTATGATCATGAGACATATGTCAAACTCCGTAGTCTAATGTACAGTGATGGAGTAGATGAATATGCAGTGAACAAGTTTCTCTGCGAAGTATTTCCTGCTCACGGGATTTCCAGCGGCCAAATATTTTCCTTGGTCAAAGAATCTGCTCAAACGGAGGCTTGA 420 0.4262 MWKFKASSYTANFSYHSSIPAKERSYVQELFGSNKIRVVVATVAFVMGLDKRDVGAVIHYSLPESPEHYEIGRAGRDGRLSFCHLFYDHETYVKLRSLMYSDGVDEYAVNKFLCEVFPAHGISSGQIFSLVKESAQTEA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1303 139 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 125 IPR001650 -
Lele22g1303 139 PANTHER DNA HELICASE RECQ FAMILY MEMBER 11 116 - -
Lele22g1303 139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 101 IPR027417 -
Lele22g1303 139 Pfam Helicase conserved C-terminal domain 14 77 IPR001650 -
Lele22g1303 139 Gene3D - 3 138 IPR027417 -
Lele22g1303 139 SMART helicmild6 3 78 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1303 Lele-ChrLele22 18532153 18534876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1303 3 110 Eukaryotic Initiation Factors Gene Family AT3G19760 33.929 5.84e-12 60.1