Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1270 ATGGAGAAGGAGAAGAAGCTCTGTTTTGTGAGAAATGGTGAGCTTAGATTACCACCTGGGTTTCGATTTCACCCAACAGATGAAGAACTTGTGGTCCAATACTTGAAGTGCAAGGTTTTCTCTTATCCTTTGCCTGCTTCAATTATCCCAGAAGTTCATGTCTGCAAATCAGATCCTTGGGACTTGCCAGGCAAGCCTCTTCATGGCTCTCGAACCGATTGGATCATGCACGAATATCGCCTTCATAATATACAGAGCTCTGTGGTGGGGATGCAGAACTGGGTTTTGTGTAGAATATTCTTGAAAAGAAGAAGCACGAGTGGGAAGAGTGAGGAACAGAGCAGTTTCAGAGTGAGGAGGGAGATGAACAGTCAAAACAAGGGGATGATGAACAACAAGAAGACAAGGCCGGTGTTTTATGACTTCTTAGCAGAGAGCAACAAGAACAACAACAACAATAATACAACTACTGATTTGAATCGCACACCTCATACGACGTCGTCGACCTCAAGCATCAGTGGAATCACACATCTCTCTTCTCACGAGTCTGATGAGCGTGAAGAAAGCAGTAGTGGCAACAGCTTGCCCTCTCTCACAAGAAACCCGTGA 609 0.4499 MEKEKKLCFVRNGELRLPPGFRFHPTDEELVVQYLKCKVFSYPLPASIIPEVHVCKSDPWDLPGKPLHGSRTDWIMHEYRLHNIQSSVVGMQNWVLCRIFLKRRSTSGKSEEQSSFRVRREMNSQNKGMMNNKKTRPVFYDFLAESNKNNNNNNTTTDLNRTPHTTSSTSSISGITHLSSHESDEREESSSGNSLPSLTRNP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1270 202 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
Lele22g1270 202 MobiDBLite consensus disorder prediction 110 202 - -
Lele22g1270 202 MobiDBLite consensus disorder prediction 144 178 - -
Lele22g1270 202 Gene3D NAC domain 67 108 IPR036093 GO:0003677|GO:0006355
Lele22g1270 202 Gene3D NAC domain 26 66 IPR036093 GO:0003677|GO:0006355
Lele22g1270 202 SUPERFAMILY NAC domain 11 102 IPR036093 GO:0003677|GO:0006355
Lele22g1270 202 Pfam No apical meristem (NAM) protein 18 65 IPR003441 GO:0003677|GO:0006355
Lele22g1270 202 PANTHER NAC TRANSCRIPTION FACTOR 56 17 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1270 Lele-ChrLele22 17469229 17470205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1270 9 195 NAC Transcription Factor Family AT5G13180 34.766 5.66e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele22g1270 NAM 7e-13 No_clan