Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1267 ATGGGCTGTTTCTCGTGTTTCGATTCGAAGGAGGATGAGCAGCTCAATCCTCGGAAAGAAACCGATGATATAAAGCAAGGCCAACCAGCCCCTTCCTCTGACATTTCCAGATTGCCGTCTGGAGCAGACAAGCTTCGTTCAAGGAGTAGTAATGGAGGATCCAAAAGGGAGCTGCCTGCTCCTAAAGACGGGCCTGGCGTCCAAATTGCTGCCCAAACTTTCACTTTCCGTGAACTTGCAGCAGCAACCAAAAATTTTAGGCCAGAATCCTTTATAGGGGAAGGTGGTTTTGGAAGGGTGTATAAAGGACGTCTAGAAAGCACGGGTCAGGTTGTTGCCGTTAAACAATTAGATAGAAATGGTCTTCAGGGTAACCGAGAATTCCTAGTGGAGGTTCTCATGCTTAGTCTTCTACATCATCCTAACCTTGTCAATCTTATTGGTTACTGTGCTGATGGGGACCAACGTCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGACAAGGAACCACTGGATTGGAACAGTAGGATGAAAATAGCAGCCGGTGCAGCAAAAGGATTGGAATACTTGCATGACAAGGCAAATCCCCCAGTTATTTATAGGGACTTTAAGTCATCTAATATATTACTAGATGAAGGATTTCATCCGAAGCTTTCTGATTTTGGTCTTGCAAAGCTCGGTCCAGTTGGTGATAAGTCACACGTTTCCACCAGAGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCCATGACTGGACAACTTACTGTGAAATCTGACGTCTATAGTTTCGGGGTAGTCTTCTTGGAGTTGATTACTGGCCGAAAAGCCATTGACAGTACCCAGCCTCATGGGGAACAGAACCTTGTTACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTTCAAAGTTGGCAGATCCTCGGCTTCAGGGACGGTATCCCATGCGAGGTCTTTACCAGGCATTAGCTGTGGCATCAATGTGCATCCAAGAACAGGCTGCCACACGTCCCCTGATCGGAGACGTGGTAACGGCTCTATCATATCTAGCCAACCAGGCATACGACCCTAATGCTTCCGGGCATGGTCATAGAGGTTTGGGCGATGATAAAAGGAACAGAGACGAAAGAGGTGGAAGGATATCCAGAAATGAGGAAGGTGGAGGATCTGGGCGCAGATGGGACCTCGAAGGGTCCGAGAAAGAAGACTCCCCACGAGAAACTGCGAGGATGCTAAACCGGGACCTAGACAGAGAACGCGCTGTGGCAGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAAAGACGGCAAAATGGCCAGGGCAATTTTGATGCTTCCAATAATAATGCCTAG 1395 0.4774 MGCFSCFDSKEDEQLNPRKETDDIKQGQPAPSSDISRLPSGADKLRSRSSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNSRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPNASGHGHRGLGDDKRNRDERGGRISRNEEGGGSGRRWDLEGSEKEDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQNGQGNFDASNNNA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1267 464 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Lele22g1267 464 MobiDBLite consensus disorder prediction 11 25 - -
Lele22g1267 464 MobiDBLite consensus disorder prediction 368 464 - -
Lele22g1267 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lele22g1267 464 PANTHER OS07G0668900 PROTEIN 3 371 - -
Lele22g1267 464 MobiDBLite consensus disorder prediction 1 66 - -
Lele22g1267 464 MobiDBLite consensus disorder prediction 376 453 - -
Lele22g1267 464 SUPERFAMILY Protein kinase-like (PK-like) 70 358 IPR011009 -
Lele22g1267 464 Gene3D Transferase(Phosphotransferase) domain 1 163 375 - -
Lele22g1267 464 CDD STKc_IRAK 92 360 - -
Lele22g1267 464 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Lele22g1267 464 Pfam Protein kinase domain 89 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1267 464 FunFam Serine/threonine-protein kinase PBS1 60 162 - -
Lele22g1267 464 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Lele22g1267 464 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1267 Lele-ChrLele22 17181886 17186363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1267 1 363 Glycoside Hydrolase AT3G07070 64.835 4.71e-171 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele22g1267 Pkinase 3.7e-45 CL0016