Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1253 ATGGCTGGTAATGTTGTGGGAAAGTTGAATGGGAATGGAACATTTGCAGTGGAGTCATCAACATCTGGATCAGTGAAGAGAAGCAGAACACCTAGCAGTGGAATCCAAGTTGCTTCATGTTTGGTTGATGGATGCAATTCAGACCTTAGTAAATGCAGAGACTATCACAGACGCCACAAGGTTTGTGAACTTCACTCTAAGACCACTAAGGTCACAGTCAGGGGTCAGGAACAACGCTTCTGCCAGCAGTGCAGCAGGTTCCATTCATTGGAGGAGTTTGATGAAGGAAAGAGAAGCTGCAGGAAACGTCTTGATGGGCACAACCGACGCCGGAGAAAGCCTCAACCAGAACCCCTGCCAATGACCCCAGCAAGATTTCTTGATGAATACCCAGGTACTAGAATCTCAGCATTCAACAATTCACAAATACTTCCAACAGGTCCTAGTTTGAGCAGTGCTTGGGGTAGGCCTATTAAAGCTGAGAATGATTATTATGTTTCCTTCAAGCTTGATAATGGCAGAAATAATGGGCCAATTGGTGAATCTCTGAGTGAGCAAGGATCACTGGGACAGAGACAAATTTCATTTCTTCAAAGCCCCAAATCCTCACTCTATGGATATTCTGCCAGTGAACTCAACTTAAATTCCAACTTTGCATCAGAAAATGCAGGCAATAACAACAAGTGCAACAGCAACAGCAACCAGAAAGCATTCTCGTATTGTGCTCGCTCTCTTCTGTCATCAACACAACCACCTGAGACTCATGAGGTTGGCTATGAAATCCCTCAAGCTTTGAACATGGATGCTTCGGAAATGGTGAGCCATGGCCATAATAATACAACTAATTGTGAGGGGATGATGTTTAGTATTGGATCTGATGGGTCTTCTTCATGTGGTTCTTCCCATAAACTCTTCATGTGGGAGTAA 927 0.4412 MAGNVVGKLNGNGTFAVESSTSGSVKRSRTPSSGIQVASCLVDGCNSDLSKCRDYHRRHKVCELHSKTTKVTVRGQEQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLPMTPARFLDEYPGTRISAFNNSQILPTGPSLSSAWGRPIKAENDYYVSFKLDNGRNNGPIGESLSEQGSLGQRQISFLQSPKSSLYGYSASELNLNSNFASENAGNNNKCNSNSNQKAFSYCARSLLSSTQPPETHEVGYEIPQALNMDASEMVSHGHNNTTNCEGMMFSIGSDGSSSCGSSHKLFMWE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1253 308 Gene3D - 31 101 IPR036893 GO:0003677|GO:0005634
Lele22g1253 308 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 19 294 IPR044817 GO:0003677
Lele22g1253 308 FunFam Squamosa promoter-binding-like protein 14 31 101 - -
Lele22g1253 308 SUPERFAMILY SBT domain 38 118 IPR036893 GO:0003677|GO:0005634
Lele22g1253 308 MobiDBLite consensus disorder prediction 104 124 - -
Lele22g1253 308 Pfam SBP domain 40 113 IPR004333 GO:0003677
Lele22g1253 308 ProSiteProfiles Zinc finger SBP-type profile. 37 114 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1253 Lele-ChrLele22 13942745 13944169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1253 36 155 SBP-box Gene Family AT5G50670 62.810 1.20e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele22g1253 SBP 2.8e-30 No_clan