Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1248 ATGTTGAATTTACAAAACTACCCCTACCCCTTTGTAAGTTGTCGTTTCTTGCTTGGTGCAAATCTCGAGCAGGGTCTTCGTTTCCGTTACAATATTAATGATCTGTACCAAGAAGCTCAAAGGCGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAACAGTATCAGATTACTCACGAGAACCCTCAACAGCCACCCAGTGGATCCTTGTTTCTGTTTAACAGAAGAGTTCTGCGCTTTTTTCGTAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTGGGAGAGGCACATGAACGACTTAAGGTTGGAAATGTTGAAGCCTTAAATTGTTATTACGCACATGGAGAGCAGAACCCCACTTTTCAGAGGCGGAGCTATTGGATGTTGGATCCGGCTTATGAGCATATTGTTCTGGTACATTACAGAGAAACAAGTGAGGGAAGGTCCAATTCTGGACCTGTCACACAACAGTCACCAGGATCCTCATCTACATTCAGTCAGAGTCCTAGCTCATACACTACCCAGAAGCTAGGGTCAACGTCCATGTTTGGTGATTCGTATGAACCTAATCAGAGTTTCTCCAGTCCTGCATCTGTAGAATTCACATCTGATGCAGCCATCAAGAATAATGAAATAGATAACTTGGATGGAATAGAGGCAGAGTCAGGAAATTCCCCTGAACTTAAGGTTACTCAAGCCTTGCGTCGACTGGAGGAGCAGTTAAGTTTGAATGAGGACAGCTTCAGAGAAATTGATTCCTTCAGCAGCGAGCAGGAGAACACACATGATTCTAGTTCCCAACAAAATACAATGGCAATCAACAATCAAGATATTAATGCAGCGTGGCCTGCACTGAGTGTTCATGGCCAATCTTATGATGGACATAGTGCCAGACAAGACCATAATTGCTCTGGCGGAACTGAGAAGACTTTGTACTGGAAGGAGATGCTGGATTCATGCAAGCCCCTGTCCTCGGCTAATTTGCAAGAGAAACACGTTTACAGACCTGGTGGAAATGGAAACTCACTTTCTTCTTCGGGAAGGTTACCAATTGCCAACCAGGAAAGCAGTCACTGGATCAGCTTTGGCAGTAACAATGCTGAAAACTCTTCCTTTTCACTGACTCAAGACATTCATGGAGTCAGATTTTCTCCATATTCTTCTATAGAAACTCAAGAAGCTAATTTGGACTGTTATGAATCATATTTTGACCAAAAGCAAATTGAAGCTCCTCTGGATGTAGATTTAGGTTTGACTGTTGCACAAAAGCAGAAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGCCACGAAGGTTATCATTGTTGGATCATTTCTGTGTCATCCCACGAGTTCTACCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCTGTTGAAATAATTCAAGATGGCGTGATCCATTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTTACTCTCTGCATTACATCTGGGAATCGGGAGTCCTGCAGTGAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGTTGTCCTCACTGCCATTCATTAGAAACAGAATCCACTAGAAGTCCTGAAGAACTGTTATTACTTGTTAGATTTGCGCAGATGATTCTTTCTGATTCTTCCATGATAGAAGCTGGAAATTATGAACTGGGAAAACAGACATTTGATGATGATTCATGGAGCCATGTTATTGAGGCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGTTGCAGTTGTGGCTTTCTTCCAGATCCCACAAAATAAATGATGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATACACATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGCGACATCAATGGATGGACTGCGCTGCACTGGGCTGCACGATTTGGGAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAACTAACCAAGATCCAACTGGTAAAACGGCTGCTTCTATTGCAGCCAACAGTAGGCATAAGGGTTTGGCAGGTTATCTTTCAGAGGTATCTCTAACAAGCCATTTATCTTCCCTCACCCTGGAAGAAAGCGAGCTGTCTAAAGATTCTGCTGAGCTTGAAGCAGAGTTAGCTGTTAGTACTGTCTCCAGTGAGCATCTAACAGCCGGTGAAGATCAGATTTCACTCAAACATACCTTGGCTGCTGTGCGTAATTCAGCTCAGGCAGCTGCACGTATACAGTCTGCTTTTCGTGCACATTCCTTTAGGAAACGGAGAGAGAGAGAAGCTGCGATTTCTGCAGCAGGTATAGATCGATATGGTTTCAGTGATAACATTCCAGAGCTTTCTGCCATGTCAAAACTTACCTCTCATGATTCACGTGATTACAATTCAGCCGCCATATCAATTCAGAAGAAGTATCGGGGATGGAAAGGCCGCAAAGATTTTTTGTCATTACGTAAGAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCATTATAAGATAATATGTTGGGTAGTTGGGTTCTTTGACAAGGCTGTGTTACGATGGAAGAGGAAAGGGGCAGGTTTGCGAGGTTTCGGACAGGAGAGAAACTCAATTGAAGAAAATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTAGATGACGCAGTTGAACAGGCTGTTTCACGGGTTCTGGCCATGGTTGATTCTCCAAATGCTCGTCAACAATATCATCGCATGCTTGAAAAGTTTCGTCAAGCCAAGGCTGAACTCGGCAGCACAAGTCAAGGAGTACCGTTATCTTTTCTGGAGGATGCCTCCAATATGGAAGATGATGTCTTAAATCAGTTTCCCTAG 2985 0.4338 MLNLQNYPYPFVSCRFLLGANLEQGLRFRYNINDLYQEAQRRWLKPAEVMYILQNHEQYQITHENPQQPPSGSLFLFNRRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSEGRSNSGPVTQQSPGSSSTFSQSPSSYTTQKLGSTSMFGDSYEPNQSFSSPASVEFTSDAAIKNNEIDNLDGIEAESGNSPELKVTQALRRLEEQLSLNEDSFREIDSFSSEQENTHDSSSQQNTMAINNQDINAAWPALSVHGQSYDGHSARQDHNCSGGTEKTLYWKEMLDSCKPLSSANLQEKHVYRPGGNGNSLSSSGRLPIANQESSHWISFGSNNAENSSFSLTQDIHGVRFSPYSSIETQEANLDCYESYFDQKQIEAPLDVDLGLTVAQKQKFTIKEVSPEWGYATEATKVIIVGSFLCHPTSSTWACMFGDVEVPVEIIQDGVIHCEAPSHLPGKVTLCITSGNRESCSEVREFEYRNKDSCPHCHSLETESTRSPEELLLLVRFAQMILSDSSMIEAGNYELGKQTFDDDSWSHVIEALLVGSGTSSGTVDWLLEELLKDKLQLWLSSRSHKINDETGSSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPTNQDPTGKTAASIAANSRHKGLAGYLSEVSLTSHLSSLTLEESELSKDSAELEAELAVSTVSSEHLTAGEDQISLKHTLAAVRNSAQAAARIQSAFRAHSFRKRREREAAISAAGIDRYGFSDNIPELSAMSKLTSHDSRDYNSAAISIQKKYRGWKGRKDFLSLRKKVVKIQAHVRGYQARKHYKIICWVVGFFDKAVLRWKRKGAGLRGFGQERNSIEENEDEDILKVFRKQKVDDAVEQAVSRVLAMVDSPNARQQYHRMLEKFRQAKAELGSTSQGVPLSFLEDASNMEDDVLNQFP 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1248 994 ProSiteProfiles Ankyrin repeat profile. 660 692 IPR002110 GO:0005515
Lele22g1248 994 SMART iq_5 834 856 IPR000048 GO:0005515
Lele22g1248 994 SMART iq_5 857 879 IPR000048 GO:0005515
Lele22g1248 994 SMART iq_5 777 799 IPR000048 GO:0005515
Lele22g1248 994 SUPERFAMILY E set domains 435 519 IPR014756 -
Lele22g1248 994 ProSiteProfiles IQ motif profile. 778 807 IPR000048 GO:0005515
Lele22g1248 994 ProSiteProfiles Ankyrin repeat region circular profile. 660 686 - -
Lele22g1248 994 Pfam IQ calmodulin-binding motif 859 879 IPR000048 GO:0005515
Lele22g1248 994 Pfam IQ calmodulin-binding motif 837 855 IPR000048 GO:0005515
Lele22g1248 994 Gene3D Immunoglobulins 429 523 IPR013783 -
Lele22g1248 994 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Lele22g1248 994 Gene3D - 835 881 - -
Lele22g1248 994 SMART CG_1_2 35 153 IPR005559 GO:0003677
Lele22g1248 994 SMART ANK_2a 660 689 IPR002110 GO:0005515
Lele22g1248 994 FunFam Calmodulin-binding transcription activator 2 834 882 - -
Lele22g1248 994 Pfam IPT/TIG domain 435 518 IPR002909 -
Lele22g1248 994 SUPERFAMILY Ankyrin repeat 629 721 IPR036770 -
Lele22g1248 994 CDD IPT 435 519 - -
Lele22g1248 994 ProSiteProfiles CG-1 DNA-binding domain profile. 32 158 IPR005559 GO:0003677
Lele22g1248 994 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 31 966 - -
Lele22g1248 994 Pfam CG-1 domain 38 151 IPR005559 GO:0003677
Lele22g1248 994 Pfam Ankyrin repeats (3 copies) 642 720 IPR002110 GO:0005515
Lele22g1248 994 ProSiteProfiles IQ motif profile. 858 882 IPR000048 GO:0005515
Lele22g1248 994 Gene3D - 571 722 IPR036770 -
Lele22g1248 994 MobiDBLite consensus disorder prediction 152 205 - -
Lele22g1248 994 Coils Coil 728 748 - -
Lele22g1248 994 FunFam Calmodulin-binding transcription activator 2 429 523 - -
Lele22g1248 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 884 IPR027417 -
Lele22g1248 994 FunFam Calmodulin-binding transcription activator 4 isoform A 542 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1248 Lele-ChrLele22 13780774 13791431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1248 28 994 CAMTA Transcription Factor Family AT1G67310 51.985 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele22g1248 CG-1 4.7e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1248 22 13780774 13791431 Lele23g0772 23 6642847 6665830 hybridization