Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1241 ATGGACTGGAATGCAAAGTCGTTCTCGCAGTGGGACTGGGAACACCTACTTTTTAACACAAAAGCAACTGAGAATCCTAGGTTAAAGCCAGTAGATTGGAGTGGCAAAGCGGATCAAGAAGTCAATGTTGGGCTGTTCAATCCATCATGTGGTATTGATAGTTCTGGGTCTGAGCTACAGCATTTTTCTTCATCAAGGGGCTCAAAATCAGCTTCTATGAATTCTTCATCAAATGGGTATAGCAGAACATCGGTACTCACTTTTGAAGGCTCCCTAGAAGATTCTAATGGTAAGAAAGAGAGGTCAAAAGAAGAGCCTCTTGGAAATTCTCCCACACTTGAACATTCTTCTGTCTCTGGTGAACCATTGCACAGTCTAAAGCTTGGCAAACGGCTGTACTTTGAAGATGTCTGTGTTGGAGGTGATACAAAGAACACATCTCACTCTGGGATTCCCGTACCATCTTTGAGTACTGGGAAAAAATGCAAGTCAAATAGTCAGAGCTCACAACCTCCACACTGCCAGGTTGAAGGCTGTAACCTTGACCTATCATCAGCTAAAGATTACCATCGCAAGCATAGAGTTTGTGAAAGTCATTCCAAATCCCCAAATGTGGTTGTAGATGGTAAGGAGCTTCGATTTTGCCAGCAATGTAGCAGGTTCCATGGTCTCTCAGAGTTTGATGGAAAAAAAAGAAGTTGCAGGCGTCGTCTATCTGATCATAATGCTAGGCGTCGGAAGCCTCATTCTGAAGCTGTCCAGTTGAATGCATCATTTTTGTCCTCATCACCATACGATGGGAGGCAACAGATGAGCCCATTTCCTAATTCTAGGGCTGCTATCAACTTCGCTTGGCCGGATACATACAGCAGCAGGATCTCCCAAACGAAAGAATTCCTCATGAAACCTGCAAAAATAGGAGGTACCATTGGGCAGGTGCATCAGCCCTTCGATGAGATCCCAAGTACCTTTTCTAAGCTTTCTGAAGGTTCTGGTGGCCTTTGCACATCCAAGGCCATGGCAACAAAGACAAACGATCCAGGGATGGAAGATTTCATTACCTCGTTAGAGCCGAATGCTCCACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAACCACCACCTCTTGGGGTCAATACGAGACTAAGTTTGCTTCTCAAGAGCACTCCAATTGCACGACTCAGGCGGTAACACACTCAATGATTCAGTGCTTGCCTTATGCTTCATCAGACTACTGGCAGACTTGTCAACAACCAGTCTCATACTCCGAGTGTAAAGATGACAGTCACTTTGAAGATTTCCAGCTGCTCAGAGCACCCTATGAGTCTGGCTTTTGCAACCAGTTGGATTAA 1353 0.4501 MDWNAKSFSQWDWEHLLFNTKATENPRLKPVDWSGKADQEVNVGLFNPSCGIDSSGSELQHFSSSRGSKSASMNSSSNGYSRTSVLTFEGSLEDSNGKKERSKEEPLGNSPTLEHSSVSGEPLHSLKLGKRLYFEDVCVGGDTKNTSHSGIPVPSLSTGKKCKSNSQSSQPPHCQVEGCNLDLSSAKDYHRKHRVCESHSKSPNVVVDGKELRFCQQCSRFHGLSEFDGKKRSCRRRLSDHNARRRKPHSEAVQLNASFLSSSPYDGRQQMSPFPNSRAAINFAWPDTYSSRISQTKEFLMKPAKIGGTIGQVHQPFDEIPSTFSKLSEGSGGLCTSKAMATKTNDPGMEDFITSLEPNAPQDFHRALSLLSTTTSWGQYETKFASQEHSNCTTQAVTHSMIQCLPYASSDYWQTCQQPVSYSECKDDSHFEDFQLLRAPYESGFCNQLD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1241 450 MobiDBLite consensus disorder prediction 57 91 - -
Lele22g1241 450 Gene3D - 164 235 IPR036893 GO:0003677|GO:0005634
Lele22g1241 450 MobiDBLite consensus disorder prediction 93 108 - -
Lele22g1241 450 MobiDBLite consensus disorder prediction 57 122 - -
Lele22g1241 450 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 60 392 IPR044817 GO:0003677
Lele22g1241 450 MobiDBLite consensus disorder prediction 144 174 - -
Lele22g1241 450 SUPERFAMILY SBT domain 172 252 IPR036893 GO:0003677|GO:0005634
Lele22g1241 450 FunFam Squamosa promoter-binding-like protein 14 165 235 - -
Lele22g1241 450 Pfam SBP domain 174 247 IPR004333 GO:0003677
Lele22g1241 450 ProSiteProfiles Zinc finger SBP-type profile. 171 248 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1241 Lele-ChrLele22 13657815 13660489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1241 1 414 SBP-box Gene Family AT5G43270 39.767 2.21e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele22g1241 SBP 1.4e-32 No_clan