Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1236 ATGTTGATGGCCTTGGACTTGGAGCAGCAATTATCACTGGGGCCGAATCCGAATCCGAATCCGAATCCCGTTGACGGCCAAACAGACGGAACCACTAATGGCGTTGATGTCCTGCCGCCGTCCGGAGAAGATGGCGTCAAAGCGCCGAGGCTGCCTCGCTGGACGAGACAGGAGATTCTGGTGCTGATACATGGGAAGAGGGACGTGGAGAACCAAATTCGAGGGAGTCGTAGTGCGGGATTGCCATTTGGGACGGGTCAGCTGGAGCCGAAATGGGCTTCGGTCTCATCCTACTGCAAGAAGCATGGAGTGAATAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAACAATTTGGCCGGAGACTATAAGAAGATCAAAGAATGGGAATCTCAGATAAGGGACGATTCGGAATCGTTCTGGGTTATGAGAAATGATTTAAGGAGAGAGAAGAAATTGCCGGGATTTTTCGATCAGGAGGCCTATGACATTCTCGATACGGGTTCGCAGGCACCGGCTTTATCTTTAGCTCTGGCACCGGCTCCCGCAACAGGGACTGTTCCGGTGGAAAAGGGTAAAGACAGCAGGGAAGTGGAGGCGGAGGAAGCGGAGGCTGATACAGAGCCAAACTTGTATGATAGTCGGAGTGCCGCCGGAGAGGATGGCTTATTCTCGGATTTCGAACAGGAAGAGGCAGGAGTGAGTCCAGAAAAGGAAGCAGCAAGGAAGGATGTCTCAACACATACGGCGCCTGTTCCTGCGTCTATTCCCATCTCAGAGAACCAATATCAACCACTTCTGCGTAGTTGTCTAGGTGAAGGAAATGCCCAAGGTGGGAGCAACGAAAAACAGCGAGGCCCAAATCCGGAAATAGGTTCTACGTCTCAAGGAGGACGGAAAAGGAAGCGGTTTCCAACAATGGATGAGGGTGAAATTCTGCAAAATCAATTGATCGATGTGTTGGAAAGAAACGGGAAGATGCTGAGTGCCCAGCTTGAAGCTCAGAACATAAATTTCCAGATGGATAGGGAGCAGAGGAAAGACCATGCTAGTCACTTAGTTGCTGTTCTTGATAAGCTTGCAGATGCTTTTGGCAGAATTGCTGATAAATTATAG 1113 0.504 MLMALDLEQQLSLGPNPNPNPNPVDGQTDGTTNGVDVLPPSGEDGVKAPRLPRWTRQEILVLIHGKRDVENQIRGSRSAGLPFGTGQLEPKWASVSSYCKKHGVNRGPVQCRKRWNNLAGDYKKIKEWESQIRDDSESFWVMRNDLRREKKLPGFFDQEAYDILDTGSQAPALSLALAPAPATGTVPVEKGKDSREVEAEEAEADTEPNLYDSRSAAGEDGLFSDFEQEEAGVSPEKEAARKDVSTHTAPVPASIPISENQYQPLLRSCLGEGNAQGGSNEKQRGPNPEIGSTSQGGRKRKRFPTMDEGEILQNQLIDVLERNGKMLSAQLEAQNINFQMDREQRKDHASHLVAVLDKLADAFGRIADKL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1236 370 CDD GT1 52 126 - -
Lele22g1236 370 ProSiteProfiles Myb-like domain profile. 53 119 IPR001005 -
Lele22g1236 370 Pfam Myb/SANT-like DNA-binding domain 53 142 IPR044822 -
Lele22g1236 370 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 370 - -
Lele22g1236 370 MobiDBLite consensus disorder prediction 181 302 - -
Lele22g1236 370 Gene3D - 54 124 - -
Lele22g1236 370 MobiDBLite consensus disorder prediction 11 48 - -
Lele22g1236 370 MobiDBLite consensus disorder prediction 230 244 - -
Lele22g1236 370 MobiDBLite consensus disorder prediction 251 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1236 Lele-ChrLele22 13343677 13346424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1236 53 127 Trihelix Transcription Factor Family AT1G33240 32.000 2.07e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele22g1236 Myb_DNA-bind_4 1.4e-12 CL0123