Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1213 ATGGGGTCCTATGAACTATCAGCAGCCGGCGGCGGCGCCTCCTCCAATGGTAGCTCCTCGAGCTCTGGAACCAAGCCAACGGAGATGGACGGGCTCCTAGCTGGCGCTGGATATAAGGTCAAGTCGTCGGAGCTTCATCATGTGGCTCGACGCCTCGAGCGCCTCGAGAATGTAATAGTCAACTCTGCTGCAGACATTTCTCAACTCGCTTCCGATGCTGTTCACTACGACCCCTCCGATATCAGCTCTTGGGTTGACACTCTTCTCACTGAATTGAACCAGACCGTTTCTCTGCCTTGTGATCTGTTGGAGTTGCCGGATCTCCCAACTTGTTCGTTGCTTGAAGATACTGCGGTAGATAATCGATGGGTTGTGGCTCAGAATGATCAGAGCCACCATAGCTTCACTTCTCAGCAGCAGCAATTTCAGCAATTGACGGTGGTAACATCGATGGAAGAGAACTCCGGGATAAGGCTGGTCCACATGTTGATGACCTGTGCGGATTTTCTTCAACGTGGCGAGCTAGCTCTTGCCGGCTCCCTTATCGAGGACATGCAGGGTTTGTTGGCGCACGTGAACACCAGCTGTGGCATCGGAAAAGTTGCCGGATACTTCATCGACGCCCTGAACCGCCGGATCTTGGCGCCACGGACCATCGTCACTGGCTCCTCCTGCACCGGCTCGCCTTATGAGGACGAGGTTTTGTACCATCACTATTACGAGGCTTGTCCTTACCTCAAGTTCTCTCACTTCACGGCGAACCAAGCCATCTTGGAAGCCTTCAACGGCCACGATTGCGTCCATGTGATCGACTTCAACCTCATGCACGGCCTCCAGTGGCCGGCCTTGATTCAAGCTCTAGCGCTCCGTCCCAGTGGGCCCCCTTTACTGAGGTTGACAGGCATTGGCCCGCCGTCTCCGGACGGCCGTGACACTCTCCGTGAAATTGGGCTGCGACTCGCTGAGTTAGCTCGGTCCGTCAACGTCCGATTCGCTTTCCGTGGTGTGGCAGCTTCCAGACTCGAAGACGTAAAGCCATGGATGCTCCAGGTAAGCCCAAAAGAAGCCGTGGCGGTGAATTCCATCATGCAGCTTCACCGCCTCCTCGGATCCGACCCAACAAGAGAACCTGCCATCCAATCCGTCCTTAGCTGGATCCGAAGCTTAAACCCGAAAATCATGACAGTGGTGGAACAAGAATCGAACCATAACCAACCTGGGTTCTTAGACCGTTTCACAGAAGCTCTGTATTACTACTCCACAGTGTTCGACTCGCTAGACGCTTGCTCGCTCCAGCCGGATAAAGCCTTAGCTGAGATATACATACAGAAGGAGATTTGCAACGTTGTGTGCTGTGAGGGATCGGCTCGCGTGGAGAGGCACGAGCCACTGGCTAAGTGGAGAGATCGGCTCACTAAAGCCGGCTTTAGGGCTCTACACTTAGGATCAAATGCTTTCAAGCAAGCCAGCATGCTCTTGACTCTGTTCTCAGCTGAAGGCTATTGTGTTGAAGAGAACGAAGGGTGTTTGACTTTGGGTTGGCACAGCCGACCCCTCATCGCGGCTTCGGCTTGGCAAGCTGCGTCAGAGTATCAAGTGGCTTGA 1605 0.5408 MGSYELSAAGGGASSNGSSSSSGTKPTEMDGLLAGAGYKVKSSELHHVARRLERLENVIVNSAADISQLASDAVHYDPSDISSWVDTLLTELNQTVSLPCDLLELPDLPTCSLLEDTAVDNRWVVAQNDQSHHSFTSQQQQFQQLTVVTSMEENSGIRLVHMLMTCADFLQRGELALAGSLIEDMQGLLAHVNTSCGIGKVAGYFIDALNRRILAPRTIVTGSSCTGSPYEDEVLYHHYYEACPYLKFSHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPSGPPLLRLTGIGPPSPDGRDTLREIGLRLAELARSVNVRFAFRGVAASRLEDVKPWMLQVSPKEAVAVNSIMQLHRLLGSDPTREPAIQSVLSWIRSLNPKIMTVVEQESNHNQPGFLDRFTEALYYYSTVFDSLDACSLQPDKALAEIYIQKEICNVVCCEGSARVERHEPLAKWRDRLTKAGFRALHLGSNAFKQASMLLTLFSAEGYCVEENEGCLTLGWHSRPLIAASAWQAASEYQVA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1213 534 Pfam Transcriptional regulator DELLA protein N terminal 30 95 IPR021914 -
Lele22g1213 534 ProSiteProfiles GRAS family profile. 150 526 IPR005202 -
Lele22g1213 534 MobiDBLite consensus disorder prediction 9 27 - -
Lele22g1213 534 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 522 IPR005202 -
Lele22g1213 534 MobiDBLite consensus disorder prediction 1 30 - -
Lele22g1213 534 Pfam GRAS domain family 159 526 IPR005202 -
Lele22g1213 534 Gene3D - 28 92 IPR038088 -
Lele22g1213 534 FunFam DELLA protein GAI 28 92 - -
Lele22g1213 534 SMART DELLA_2 30 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1213 Lele-ChrLele22 10465676 10467280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1213 29 529 GRAS Transcription Factor Family AT1G14920 48.851 1.80e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele22g1213 GRAS 5e-126 CL0063