Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1180 ATGGACAATCTGCGATTGATTAGCCTGGCAACTTGCATTGTCAGCACTTCGTGGGAAGACTTGGAAGACTTTGAAGTTACGGCCACCATTGCAAGAATCCTTATTGCTTATTATCGTTTATCCAATTCTGAGATTGTTGTGAAAGACTTGGAAGACTTTGAGATTATTATGGCCACCATTGCGATTCTGCAATTCTGTGAGATTTTAGTGGCCATGGCTACCATTGCATCAAACATGTACTTTCTTCTATTACTATCTTTTCTATGCGGAAGATTTGAAATATTATCTGCAAAAACAATACCACTCGGCGATTCAATTAATCCCACTTCACCATGGCGTTCACCTTCTGGTCGATTTGCATTTGGCTTTTACGAGCAAGGCTATGGCTTCAAAGTTGGAATTTGGCTACTTGATGGGTTAGATAAAACAATCGTCTGGACTGCAAATCGTGATGATGCTCCTGTCTCCTCAAATGCAACGCTTGTACTAACCATGAGAGGCGTGCTTCTTCTTCAAACAGGTGATCCAGGGAAAGAGAAAAAGATTATTAATGCTCATAGTAACAATGGAACTGTTTCGTCTGCTTCCATGCTTGATTCTGGAAACTTTGTTCTGCAAAACAAAAGTACGGACATCCTTTGGCAGAGTTTCGATCACCCAACTGATACTATGTTAGGGGGTCAAATTCTACCTTCCGGGCATCAATTGGTGTCTAGTTCATCAGATAACAACCAATCTTCTGGAAGGTTTCAACTCTCGATGCAAGCTGATGGAAACCTTGTTTTATATCCACGATATTCTGGTCACACAAGATGGGATGCTTACTGGACGTCTAAAACTGGCTATGGCACTAGTTTCAAATATTATCTTTTCCTCAACAAAACAAATCCTCATCAGCCTCTATGTGTTGTAAATGCCAGTAGTTCCAACTCAGAAACACTTTCGAGTTTGTATACTATCAGCAGCTTCAAAGGAAACAACACTATTTATCGAGCAACTATTCATTCTGATGGAATTTTACGAGTCTATGCTCATTTTGACGACGCAAATCGGCAACATCAAGTTAAGAAGTTGTGGTCGCCGGAAGATTTGGACAGTCGTTGTAATGTGAACGCTTTTTGTGGGTTCAACAGCTATTGTACCTTTGATGACAGCGAGCCTTCTTGCAAATGTCTTCCCGGAACTGATTTTATAGACCCCAGTCATCAGAATCTTGGATGCGAAAGGAACTTCTTACAAGCTGATTGTAAAGGTGGTGGGAAAGAAAATACAAATTTTTATTACATGTCCAACATGACTAGTATGATCATGGGAGATCTTCCTTATACAGAGGAAGAGATTCAGGAGGAGGACTGCCCATCTTCTTGTTTGCAAGATTGTTACTGTGGAGCTGCCTTCTATGAAGATCCTTCGTGTAACAAACTAAAGTATCCTTTAAGATATGTTACAAGAAAAACAGAAGGGTCGTCCTACACAGCATACTTCAAGGTGGGAATTCAAAGCCTCAAAAGCAACAATACTTCTTCCCCCAAGACCATCATCAGTAAGAAAGCAATTGTGCAGTTCATTGTTGTCGTCTTTGGTTTTGCTATTCTTTTGTGTTCAGCTGTTGCAATCTCTAGCCAATTTATATACAAGATTGGAGTTTTACGTTACAAGAGGTTGTTGGAGATGGGAGATCTGGGATTGAATGAAGGGATTACTCTGAGGGTATTCTCATACAACGAGCTGAAAAAAGCAACGAATGGTTTCAAACAAGAGGTGGGTAAGGGCTCCTTCGGATCAGTCTACAGAGGAAGTTTACACAAAGGAAGAAAATCGATTGCTGTAAAAAGGCTACACAGGTTCATTGAAGATGGAGAGAGAGAATTTCGAGCTGAAATGCAAGCCATTGGGAAAACCCATCACAAGAACTTAGTTCGCTTGCTCGGATATTGTGCCGAGGGATCTAAAAGACTTCTTGTTTATGAGTACATGAGCAATGGCTCCCTTGACAAGTTTATCTTCGGAGATAGCACTATTCGTCCAGATTGGGATGAGAGAAGAAGAATAGCACTAGACATTGCGAGAGGGTTGTTGTATCTCCATGAACAATGTGGGGCTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTTTTTTACAGCTAAAATATCAGACTTTGGGTTAGCTAAACTTCTGATGCCGGATCAAACAAGAACCTTCACTCAAGTGAGAGGAACAAGAGGTTATTTGGCGCCAGAATGGAATAAGAACACTCCAATAACAGTGAAAGCAGATATTTACAGCTACGGAGTTATGCTATTGGAGATTGTGTTTTGCAGAAGAAGCTTGGTGGTTAACATGTTTAATCCAGAGCAAATTGTTCTCTCCAATTGGGTGTACAAGTGCTTTGTTCGTCATGAGTTAAACAAGCTTCTTGTTGGGGAAGAAGTGGATAATACGTTGCTGGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGATGAAGCTTTTCTGCGGCCATCAATGAAGAGTGTTGTGTTGATGCTTGAAGGAGTTACGGAGGTGGCTATTCCTCCTTGTCCGTCTCCTGATTCTACATGA 2604 0.409 MDNLRLISLATCIVSTSWEDLEDFEVTATIARILIAYYRLSNSEIVVKDLEDFEIIMATIAILQFCEILVAMATIASNMYFLLLLSFLCGRFEILSAKTIPLGDSINPTSPWRSPSGRFAFGFYEQGYGFKVGIWLLDGLDKTIVWTANRDDAPVSSNATLVLTMRGVLLLQTGDPGKEKKIINAHSNNGTVSSASMLDSGNFVLQNKSTDILWQSFDHPTDTMLGGQILPSGHQLVSSSSDNNQSSGRFQLSMQADGNLVLYPRYSGHTRWDAYWTSKTGYGTSFKYYLFLNKTNPHQPLCVVNASSSNSETLSSLYTISSFKGNNTIYRATIHSDGILRVYAHFDDANRQHQVKKLWSPEDLDSRCNVNAFCGFNSYCTFDDSEPSCKCLPGTDFIDPSHQNLGCERNFLQADCKGGGKENTNFYYMSNMTSMIMGDLPYTEEEIQEEDCPSSCLQDCYCGAAFYEDPSCNKLKYPLRYVTRKTEGSSYTAYFKVGIQSLKSNNTSSPKTIISKKAIVQFIVVVFGFAILLCSAVAISSQFIYKIGVLRYKRLLEMGDLGLNEGITLRVFSYNELKKATNGFKQEVGKGSFGSVYRGSLHKGRKSIAVKRLHRFIEDGEREFRAEMQAIGKTHHKNLVRLLGYCAEGSKRLLVYEYMSNGSLDKFIFGDSTIRPDWDERRRIALDIARGLLYLHEQCGAPIIHCDIKPQNILMDEFFTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPITVKADIYSYGVMLLEIVFCRRSLVVNMFNPEQIVLSNWVYKCFVRHELNKLLVGEEVDNTLLENMVKVGLWCIQDEAFLRPSMKSVVLMLEGVTEVAIPPCPSPDST 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1180 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 143 280 IPR036426 -
Lele22g1180 867 FunFam S-receptor-like serine/threonine-protein kinase 557 658 - -
Lele22g1180 867 Pfam Protein kinase domain 585 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1180 867 ProSitePatterns Protein kinases ATP-binding region signature. 588 611 IPR017441 GO:0005524
Lele22g1180 867 Gene3D Phosphorylase Kinase; domain 1 560 658 - -
Lele22g1180 867 ProSiteProfiles Bulb-type lectin domain profile. 97 218 IPR001480 -
Lele22g1180 867 SMART blect_4 99 220 IPR001480 -
Lele22g1180 867 CDD STKc_IRAK 588 852 - -
Lele22g1180 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Lele22g1180 867 Pfam D-mannose binding lectin 143 228 IPR001480 -
Lele22g1180 867 SMART serkin_6 582 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1180 867 PIRSF SRK 70 867 IPR024171 GO:0004674
Lele22g1180 867 Gene3D Transferase(Phosphotransferase) domain 1 659 857 - -
Lele22g1180 867 Gene3D - 93 218 IPR036426 -
Lele22g1180 867 ProSiteProfiles Protein kinase domain profile. 582 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1180 867 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 102 863 - -
Lele22g1180 867 SUPERFAMILY Protein kinase-like (PK-like) 567 851 IPR011009 -
Lele22g1180 867 FunFam Putative receptor-like protein kinase 659 858 - -
Lele22g1180 867 Gene3D - 221 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1180 Lele-ChrLele22 9419340 9422262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1180 572 860 Receptor kinase-like Gene Family AT5G20050 42.395 1.57e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele22g1180 Pkinase 2e-47 CL0016