Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1179 ATGGCCGCCATAACTCTGTTCTTACTATTTGCAGTTCTATCTGCAAACCAAGTTAGGGCTCAAAGAAATGATTCCCACATCATAACTTTGGGTTCTCCTCTCTCCCCAGAAACGAATTCTACTTCATGGGTGTCATCGTCTGGTCTTTTTTCCTTCGGATTTCATCGACAAGATAATGGCTTTGCTGTTGGAATACGTCTAAAGGGTGAACATGAAGGAACAATCGTTTGGAAACCTGACGACTTGAACAATCTATCTGCTTCCCCTGATTCAGTAATCGAATTAACCAAAGATGGTAAAGTTGTGCTTAGAAACAAGAAACAGATGGACGTAGTCATTGCTAATGCGTCTGAGCCTGCAGATTCAGCATCTATGCTTGATTCTGGGAATTTTGTGCTTTATAGTAAAAACCGCAGTGTCATCTGGCAAAGCTTTGATCACCCCACCGACACCATATTAGGAGGTCAGAATTTATCGACGTACCAAAAACTCATCTCTGCAAATAGACATTTTTTTCTCTATGTGAAATATGATGGAGATCTTGTTGCCTGTCCCATGAACAATGAAACAGAAGATGATACTTACTGGGCCTCAGGTACTTCTCAATCATTTCTTTATTTGCAATGGAACCCACAGCTTACTCTTAATCTTACAGGCTTTCTTTGCCTAATTGATGGTGATGGGAATACCACCAAGGTTCTGGCCAATAGTAGCAACTACCTTGGAATGACCACAAGCTTAATCTATCGTGCAACATTGGATTTCGATGGTATTTTTAGATTGTATGTTCACACATTTGAGAAGAATCCAGCTAGCTTCAATGTTGAACATGTGTGGCAATCTGTGTCTAATCAATGTGAAGTCAAGGGCTTTTGTGGTTTCAACAGTTATTGCTCCATGAATGGCAGTGAGGCAGTTTGTGAGTGTTACCCTGGATTCATGCCCATAATTAATGGGAATAATAATAAAAGCATGTTCTTGGACTGCGAACAAAGAAAAAAAGGTGACTGTAAAACTAGTGAAGATCCAAACATGTTGTACGATGTTGTTCCCTTAAGAGACGTGCAATTGGGCCTTATTCCTTATTTGGCCATACCATTGGAAATGGAAGCTTGCGGGAAGTCTTGCCAAGAAGACTGTGATTGTGGGGCAGCATTACATGAATATGGCTTTTGCAAGAAGTATGGGCTTCCGCTTAGATTTGGCAGAATTAATCGAACTGTATCAACCACATGCTTCTTCAAGTTGCCTTCAACAAAAATCATTCCTCCAAATCCAAAGAAGCCAGCAGAGGTTCTTGTTGATGACAAGAAAAATCTGATTTTAACTCTGGTCATCACTCTTGGTTCGATTTCATTCCTTTGCTTAGTCTTTGCAATATCTACTTTCCTCATCTACATGAGTAAAGTCTATTCATACGCAAAGCTCTCTGCCAGTAGCGAAAGTTTGGGGTTTGCTGAGGATTGTAGTTTACGAACATTTACCTTTGATGAATTGGTGAATTCAACGGGAAATTTCACAGAAGAGATTGGTAGAGGATCTTTTGGGGTGGTTTACAAGGGCACAATTCAAGGAAATAATACAAGTATAGCCGTGAAGAAACTAGACATAGTTGTTGATGAAGAAAGAGAATTTAAAGCAGAAATCACTGCAATCGCTCAAACTCATCACAGGAATTTGGTTCAGCTCGTTGGTTATTGCATCGATGGATCAAAAAAGCTTCTTGTTTATGAATATATGAGCAATGGATCTCTAGCAGATTTTCTGTTCAAGGCTGAGATGCATCTATCTTGGAAACAAAGAGTCAAAATTGCATTGGATGTAGCAAGAGGAGTTCTATATCTACACGAAGAATGTGAAGTTTGTATTGTGCACTGCAATATCAAGCCTCGTAACATTCTCTTGGATGAAATGTGGACAGCAAAAATATCTGATTTTGGACTTGCAAGGCTTTCGATGCCGGAACATTCAAGAATCAGAAGTACCAATGAATTAACAAGTGGCTATATGGCACCTGAACGGCAAAGAGATGCAATGGCATCTGTTAAGGTTGACGTCTACAGCTATGGAGTGGTGCTGTTGGAGATCATATGTTGCCGAAGGAACATAGATGTGAAAGTTGCTTCAGAAGAGGAAATGATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAAAGGGGAGTTGAAGAAACTAGTAGTGGATGAAGATGTAGAATGGAGGACATTGGAGAGAATGGTGAAGGTGGCCTTATGGTGTGTACAAGAAGACTTGTCTCTACGTCCTTCCATGAAGAATGTGATACTCATGTTGGAAGGGTTAAAAGATATCCCAGTTCCTCCATCTCCAATCCCCCTTGCTTGA 2361 0.4024 MAAITLFLLFAVLSANQVRAQRNDSHIITLGSPLSPETNSTSWVSSSGLFSFGFHRQDNGFAVGIRLKGEHEGTIVWKPDDLNNLSASPDSVIELTKDGKVVLRNKKQMDVVIANASEPADSASMLDSGNFVLYSKNRSVIWQSFDHPTDTILGGQNLSTYQKLISANRHFFLYVKYDGDLVACPMNNETEDDTYWASGTSQSFLYLQWNPQLTLNLTGFLCLIDGDGNTTKVLANSSNYLGMTTSLIYRATLDFDGIFRLYVHTFEKNPASFNVEHVWQSVSNQCEVKGFCGFNSYCSMNGSEAVCECYPGFMPIINGNNNKSMFLDCEQRKKGDCKTSEDPNMLYDVVPLRDVQLGLIPYLAIPLEMEACGKSCQEDCDCGAALHEYGFCKKYGLPLRFGRINRTVSTTCFFKLPSTKIIPPNPKKPAEVLVDDKKNLILTLVITLGSISFLCLVFAISTFLIYMSKVYSYAKLSASSESLGFAEDCSLRTFTFDELVNSTGNFTEEIGRGSFGVVYKGTIQGNNTSIAVKKLDIVVDEEREFKAEITAIAQTHHRNLVQLVGYCIDGSKKLLVYEYMSNGSLADFLFKAEMHLSWKQRVKIALDVARGVLYLHEECEVCIVHCNIKPRNILLDEMWTAKISDFGLARLSMPEHSRIRSTNELTSGYMAPERQRDAMASVKVDVYSYGVVLLEIICCRRNIDVKVASEEEMMLSSWVYNCFVKGELKKLVVDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNVILMLEGLKDIPVPPSPIPLA 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1179 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 781 - -
Lele22g1179 786 SMART blect_4 34 148 IPR001480 -
Lele22g1179 786 CDD STKc_IRAK 510 773 - -
Lele22g1179 786 ProSitePatterns Protein kinases ATP-binding region signature. 510 534 IPR017441 GO:0005524
Lele22g1179 786 Pfam S-locus glycoprotein domain 240 315 IPR000858 GO:0048544
Lele22g1179 786 SUPERFAMILY Protein kinase-like (PK-like) 488 771 IPR011009 -
Lele22g1179 786 ProSiteProfiles Protein kinase domain profile. 504 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1179 786 Gene3D - 24 146 IPR036426 -
Lele22g1179 786 FunFam S-receptor-like serine/threonine-protein kinase 473 579 - -
Lele22g1179 786 Pfam D-mannose binding lectin 74 161 IPR001480 -
Lele22g1179 786 ProSiteProfiles Bulb-type lectin domain profile. 149 274 IPR001480 -
Lele22g1179 786 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Lele22g1179 786 PIRSF SRK 1 786 IPR024171 GO:0004674
Lele22g1179 786 Pfam Protein tyrosine and serine/threonine kinase 506 767 IPR001245 GO:0004672|GO:0006468
Lele22g1179 786 Gene3D Phosphorylase Kinase; domain 1 468 579 - -
Lele22g1179 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 778 - -
Lele22g1179 786 Gene3D - 149 290 - -
Lele22g1179 786 Gene3D Transferase(Phosphotransferase) domain 1 580 779 - -
Lele22g1179 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 200 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1179 Lele-ChrLele22 9415441 9417801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1179 435 786 Receptor kinase-like Gene Family AT5G10530 35.068 1.71e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele22g1179 PK_Tyr_Ser-Thr 1.9e-47 CL0016