Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1160 ATGGATGGCAACAAGGACGATGCATTAAAATGCTTGAAAATTGGGAAAGAGGCATTAGAAAGCGGGGATCGGGCTCGCGCTTTGAAATTTGTTACCAAAGCTCGCCGTCTTGACCCGACTTTGTCCGTCGAAGATCTATTGGCGGAGATAGAGAAAGATACAGGTGACCAACCGCCGACGGCGGCTGCCAATGGACCATCAGTGACGTCTTCATCGAAGCCTTCTGATCAACCTTCTCTTCGACGAAGGGCTTCGATAGCAGAGTCTTCATCCTCTACGTCATCAGCTGCATATACGGAGGAGCAAATTACGATTGTTAGAGAGATTAGGAGGAAGAAGAATTATTATGAGATTTTGGGAGTAGAGAAGAGCTGTACGGTTGAGGATGTGCGAAAAGCGTACAGAAAATTGTCTTTGAAGGTTCATCCTGATAAGAACAAAGCTCCTGGTGCTGAGGAAGCGTTTAAGGCCGTGTCTAAAGCTTTCCAGTGTCTGAGTAGTGATGAGAGTCGAAGGAAGTATGATCTTGTTGGAGAGGATGAATCCGTTTACCAAAGACGTGCTGCAAGGCCAGCAACAAGGGCATATAACGGGTATTATGAAGCTGATATTGATGCGGAGGAAATATTTAGGAATTTCTTTGGTGGAATGGCTCCTACAACACCTTTTGGTGGCTTTAGTTTTGGACCGGGGATGGGTCCCAGGCCGGCGGCTGAACATGGTTCTAGTGGTTTTAATGTTCGCGCTTTAATTCAGTTACTTCCTGTTCTGCTTATTCTGCTATTGAACTTCTTGCCGTCTTCAGATCCCATTTATTCACTTTCTCGACAGTATCCATATGAACATCGGTTTACTACACCAAAGGGTGTCAACTATTATGCTAAGTCGGCTAAATTTGATCAAGATTACCCACCAAATAGCCATGAGCGAACAACACTTGAAGATAGGGTTGAGAGTGATTACCTCAATATTCTTAGAGAGAATTGTCGGCTTGATGAACTAATAAGTGAATTAAGATTGCATGTTGACGGGGATGCTTAG 1041 0.4448 MDGNKDDALKCLKIGKEALESGDRARALKFVTKARRLDPTLSVEDLLAEIEKDTGDQPPTAAANGPSVTSSSKPSDQPSLRRRASIAESSSSTSSAAYTEEQITIVREIRRKKNYYEILGVEKSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSSDESRRKYDLVGEDESVYQRRAARPATRAYNGYYEADIDAEEIFRNFFGGMAPTTPFGGFSFGPGMGPRPAAEHGSSGFNVRALIQLLPVLLILLLNFLPSSDPIYSLSRQYPYEHRFTTPKGVNYYAKSAKFDQDYPPNSHERTTLEDRVESDYLNILRENCRLDELISELRLHVDGDA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1160 346 PRINTS DnaJ domain signature 134 149 IPR001623 -
Lele22g1160 346 PRINTS DnaJ domain signature 150 170 IPR001623 -
Lele22g1160 346 PRINTS DnaJ domain signature 116 134 IPR001623 -
Lele22g1160 346 PRINTS DnaJ domain signature 170 189 IPR001623 -
Lele22g1160 346 FunFam Chaperone protein dnaJ 49 110 224 - -
Lele22g1160 346 Pfam Domain of unknown function (DUF1977) 266 330 IPR015399 -
Lele22g1160 346 PANTHER AT29763P-RELATED 1 331 - -
Lele22g1160 346 CDD DnaJ 114 166 IPR001623 -
Lele22g1160 346 MobiDBLite consensus disorder prediction 48 93 - -
Lele22g1160 346 ProSiteProfiles dnaJ domain profile. 114 178 IPR001623 -
Lele22g1160 346 Pfam DnaJ domain 114 175 IPR001623 -
Lele22g1160 346 Gene3D DnaJ domain 110 222 IPR036869 -
Lele22g1160 346 MobiDBLite consensus disorder prediction 60 93 - -
Lele22g1160 346 SUPERFAMILY Chaperone J-domain 111 229 IPR036869 -
Lele22g1160 346 SMART dnaj_3 113 170 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1160 Lele-ChrLele22 8930396 8932503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1160 109 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.437 1.07e-09 57.4