Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1140 ATGACAAAGAAGCTAGCAAGTATGAGCACCACCATAGAGAATCATGAATATGATATTGATTATTCTATTAATGCTATGATGCTACCATCTGGTCACATCTATCTTGCTGTATTAAATGCTGCCATTGAGCTCAACTTGTTTGAGATCATTGGTAAGGGAAGTCCAGAGGGCATGTCACCTTCTGAAATCGTTTCCAAGCTTCCAAATACACACGAGGGTGCCAGTCTCAATCATCGCCTTGATCGGATGCTGCTTTTGCTTGCTAATTGCTCCCTATTGACTTGTTCTTCCTCCATGAAACTTGATCAATATGGTAGGATTGATAGGCTTTATGGTCTGTCTCCTCTTGTAAGATACTTGTTCGAGAATGAAGAAGATGATGGAGCCTCCTGTGTTTCACTCTTGAAATTAGCTGGCCATCCCACTTTTTTAAAAGTTTGGCAACAAGTTATTCTTGATGAGGAAGAAGATGTGTTCAAGAAAGTTCATGGAATGTCTCTGTTTGAATATACTGAAATAGATCCAACATTTAAAACTATTTTTCATAAGGCAATGGCTGATATATCAATCATTCAGATGAAGCAAGTACTTGAGATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGGAGCTGATGGCATTGGCCAAAGCCTCAAAATGATCATTTCCAAGTATCCTTCAATTCAAGGCATTAACTTTGACTTGTCACAAGTGGTACAACATGCACTATCCCATCCAGGAATGATGCATGTTGGAGGAGATATGTTCAAAAGTGTCCCTCAAGGAGATGCTTTAATGATCAAGGAAAGAACAGAGAAAGAATTTGCTGGGTTTTCTAGTTATTGTGCTGCTGCTCGTGTTGCCTCCACAGCTTTGGGTATCATTGAACTTTATAAATAA 906 0.3885 MTKKLASMSTTIENHEYDIDYSINAMMLPSGHIYLAVLNAAIELNLFEIIGKGSPEGMSPSEIVSKLPNTHEGASLNHRLDRMLLLLANCSLLTCSSSMKLDQYGRIDRLYGLSPLVRYLFENEEDDGASCVSLLKLAGHPTFLKVWQQVILDEEEDVFKKVHGMSLFEYTEIDPTFKTIFHKAMADISIIQMKQVLEIYKGFEGISTLVDGADGIGQSLKMIISKYPSIQGINFDLSQVVQHALSHPGMMHVGGDMFKSVPQGDALMIKERTEKEFAGFSSYCAAARVASTALGIIELYK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1140 301 SUPERFAMILY "Winged helix" DNA-binding domain 20 124 IPR036390 -
Lele22g1140 301 PANTHER O-METHYLTRANSFERASE 28 268 IPR016461 GO:0008168
Lele22g1140 301 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Lele22g1140 301 Pfam O-methyltransferase domain 150 270 IPR001077 GO:0008171
Lele22g1140 301 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 301 IPR016461 GO:0008168
Lele22g1140 301 PIRSF O-mtase 3 276 IPR016461 GO:0008168
Lele22g1140 301 Pfam Dimerisation domain 37 88 IPR012967 GO:0046983
Lele22g1140 301 Gene3D Vaccinia Virus protein VP39 123 275 IPR029063 -
Lele22g1140 301 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 269 IPR029063 -
Lele22g1140 301 Gene3D - 4 120 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1140 Lele-ChrLele22 8686253 8688480 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1140 18 270 Monolignol Biosynthesis Gene Families AT5G54160 47.471 7.08e-68 214