LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele22g1130	ATGGCTATCACTGTTTTGGCTTTTATGCTATTACTGCAGTTGCCAAGAATTTTTGGCTTTGGGGATTTGTTGCAGTCAAAGGATTGTGGTGTGAATTGGGTAGCCTGTTCATATTCTCATGGTCAAGACCTATTTTACATAAACGGGAATGTTGTTAGTAAAGACACTTTCTGCAAGACCCTTCAGTTGTATATGGTAAATGGTTGTGATGCGAAGTACTATTTTGGAAGTACAAGCTGCGGGCTGGAAGTTTCTTTTGGAAGAAAGCTTTTGCAGAATGATATAAGCAATAACCCAACATTCCCAGGTCACAAGAACTTTTCTAAGCCCCTATCAGGCTCGAAAGTTGGTATAGCTGCAAGTGGAGTTTTGTTTGTATGTTGTGTTTTTCTCTGTCCTTGTTTCTATGGGAAGAGACAAAAAGCCACTGCTCATCCTGGTCTATCCAAGGACCCAAATTCAATGGATTCAGCTTCCTCATTGGAAGGGAACTCTGTTTCTGAGAAGACCCAGGGCTCTCTCCATCGGGTACCACCTAGTCCTTCAAGATTTTCAATGTCTCCAAAACTCAGTAGACTTGGGCCAATACATCTCAACTTGAGTCAGGTTGTAAAAGCTACTCATAATTTCTCGAATAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGCTAGAAGGTGGTCAGGTTGTGGCAGTAAAGCGTGCCAAAAGGGAACAATTTGAGAATTTGAAAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACTTGGTGAAGTTACTAGGTTATATTGACCAAGGAAATGAACGCCTTCTTATTGCAGAGTATGTCCCGAATGGCACTCTTAGAGAACATTTGGATGGTTTGCGTGGAAGGATCCTTGACTTCAATCAGCGCCTTGAAATTGCCATTGATGTTGCTCATGGCTTGACCTATCTACATCGTTACGCAGAAAAGCCAATTATCCATAGAGATGTGAAATCATCCAACATTCTTCTAACGGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGGTTTGCAAGACTTGGTCCAATGGACTCTGATCAGACACACATCTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGATCCAGAGTACATGAAAACATATCAGCTTACTCCCAAGAGTGATGTTTATTCATTTGGAATTTTGCTTTTAGAAATTGTGACCGGCCGCCGTCCTGTGGAAGTGAAGAAACCTGTTGAAGAGAGGGTCACATTGAGATGGGCTTTCAGAAAGTATAATGAAGGAAATGTGGTAGAAATGGCGGATCCTTTAATGGAGGAAGGTGTAAATGGAGAGGTTCTGATGAAGATGATTGGTTTAGCCATTCAATGTGCAGCACCAAGTCGAGCTGATCGGCCTGACATGAAATCCGTGGGAGAACAATTGTGGACAATCAGGGCAGAATTCCTCAAGAGTTCAAAGAGGGTGTAA	1491	0.4178	MAITVLAFMLLLQLPRIFGFGDLLQSKDCGVNWVACSYSHGQDLFYINGNVVSKDTFCKTLQLYMVNGCDAKYYFGSTSCGLEVSFGRKLLQNDISNNPTFPGHKNFSKPLSGSKVGIAASGVLFVCCVFLCPCFYGKRQKATAHPGLSKDPNSMDSASSLEGNSVSEKTQGSLHRVPPSPSRFSMSPKLSRLGPIHLNLSQVVKATHNFSNKLQIGEGGFGTVYKAQLEGGQVVAVKRAKREQFENLKTEFSSEVELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDFNQRLEIAIDVAHGLTYLHRYAEKPIIHRDVKSSNILLTESMRAKVADFGFARLGPMDSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVEVKKPVEERVTLRWAFRKYNEGNVVEMADPLMEEGVNGEVLMKMIGLAIQCAAPSRADRPDMKSVGEQLWTIRAEFLKSSKRV	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele22g1130	496	SMART	serkin_6	210	484	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele22g1130	496	FunFam	Calmodulin-binding receptor-like cytoplasmic kinase 3	287	496	-	-
	Lele22g1130	496	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	100	488	-	-
	Lele22g1130	496	Gene3D	Phosphorylase Kinase; domain 1	182	286	-	-
	Lele22g1130	496	SUPERFAMILY	Protein kinase-like (PK-like)	192	485	IPR011009	-
	Lele22g1130	496	CDD	STKc_IRAK	216	482	-	-
	Lele22g1130	496	ProSiteProfiles	Protein kinase domain profile.	210	490	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele22g1130	496	Gene3D	Transferase(Phosphotransferase) domain 1	287	495	-	-
	Lele22g1130	496	ProSitePatterns	Protein kinases ATP-binding region signature.	216	238	IPR017441	GO:0005524
	Lele22g1130	496	MobiDBLite	consensus disorder prediction	145	188	-	-
	Lele22g1130	496	Pfam	Protein tyrosine and serine/threonine kinase	214	482	IPR001245	GO:0004672\|GO:0006468
	Lele22g1130	496	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	331	343	IPR008271	GO:0004672\|GO:0006468
	Lele22g1130	496	MobiDBLite	consensus disorder prediction	150	187	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele22g1130	Lele-ChrLele22	8509810	8513642	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele22g1130	113	486	Receptor kinase-like Gene Family	AT3G46290	39.895	1.43e-74	249

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IV	Lele22g1130		PK_Tyr_Ser-Thr	9.7e-50	CL0016