Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1124 ATGGATAACAACACCATCTTTGACTCCGACATTGTTCTTCTAGAATCAATCCGGAGCTACCTTCTTGATGACGAATCCGATGCTCTCATTGCATTTCCGGCAACATTCGCCGGCGTCGCTCCGGTTTGCCTCCAGAGTTCTAGTTCTAGGATGACGGAGAACAGCGACGGTGAGATTAGCTCTCCATCTTTCTCGTCCCAACAAACAGCAAACACTTCCACCGTGGCGGAGGTTTGCAGTAGAGCAGATGTATTGGCGCGTGTGGTCCACGCGCCACCGAGTGGGAGATGCTACAGGGGAGTAAGGCGGAGGCCGTGGGGGAAATACGCTGCGGAGATTAGAGATCCCAAGAAGAACGGCGCGAGAGTGTGGGTTGGGACTTATGAGACGGCTGTGGACGCAGCTTTGGCTTATGATCAAGCCGCTTTCAAGATGCGCAGCTCCAAAGCTAAGCTGAATTTTCCTCATCTCATTGGCTCAAATATGACGGAGCCACCAAGAGTGACCAGAAAGCGGCAGTTGCGAGAGCCTTGTGAGGAGGAGGCATTGACGGAGGTTAGCTTTGGCTTATGA 573 0.5271 MDNNTIFDSDIVLLESIRSYLLDDESDALIAFPATFAGVAPVCLQSSSSRMTENSDGEISSPSFSSQQTANTSTVAEVCSRADVLARVVHAPPSGRCYRGVRRRPWGKYAAEIRDPKKNGARVWVGTYETAVDAALAYDQAAFKMRSSKAKLNFPHLIGSNMTEPPRVTRKRQLREPCEEEALTEVSFGL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1124 190 Gene3D AP2/ERF domain 97 156 IPR036955 GO:0003700|GO:0006355
Lele22g1124 190 SUPERFAMILY DNA-binding domain 97 156 IPR016177 GO:0003677
Lele22g1124 190 PRINTS Ethylene responsive element binding protein signature 137 157 IPR001471 GO:0003700|GO:0006355
Lele22g1124 190 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Lele22g1124 190 FunFam Ethylene-responsive transcription factor 2 96 156 - -
Lele22g1124 190 PANTHER DNA-BINDING DOMAIN 60 166 IPR044808 GO:0003700|GO:0009873
Lele22g1124 190 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
Lele22g1124 190 CDD AP2 98 157 IPR001471 GO:0003700|GO:0006355
Lele22g1124 190 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700|GO:0006355
Lele22g1124 190 SMART rav1_2 97 161 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1124 Lele-ChrLele22 8405892 8406464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1124 90 184 AP2-EREBP Transcription Factor Family AT2G44840 68.750 4.00e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele22g1124 AP2 1.9e-14 CL0081