Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1109 ATGGATGGGCACACAGGGAAGGCGGAGGAGAAGGGGAAGGAGGAGGTCCGATACCGGGGGGTGAGGAGGCGGCCGTGGGGGAAGTATGCGGCGGAAATAAGGGATCCGTCAAGGCAAGGAGCGAGGCAGTGGCTTGGGACATATGATACGGCGGAAGAAGCAGCAAGAGCTTATGACAAAGCTGCCTTTAACATGAAAGGCCATCTCGCAACCCTTAATTTCCCCACCGAATACTATGCTCATGTACGAGGTTCCCCACCATATCCTCCCTATTTAGCATCTTCTTCTTCGCTGTCGTCGCCTTCTTTTCATGGCCATGAAAGTGGAAGCTCTCCTTCACTACGGAGGAAGGCTTTTGAAATTGAGTGTTTGGATAATCAGGTGCTTGAAGACCTTCTTGAACCAGAAGATGAGAAGAAGAAAACTGATGGAGATTAA 438 0.5068 MDGHTGKAEEKGKEEVRYRGVRRRPWGKYAAEIRDPSRQGARQWLGTYDTAEEAARAYDKAAFNMKGHLATLNFPTEYYAHVRGSPPYPPYLASSSSLSSPSFHGHESGSSPSLRRKAFEIECLDNQVLEDLLEPEDEKKKTDGD 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1109 145 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Lele22g1109 145 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Lele22g1109 145 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Lele22g1109 145 MobiDBLite consensus disorder prediction 85 113 - -
Lele22g1109 145 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Lele22g1109 145 MobiDBLite consensus disorder prediction 90 109 - -
Lele22g1109 145 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Lele22g1109 145 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Lele22g1109 145 Gene3D AP2/ERF domain 16 77 IPR036955 GO:0003700|GO:0006355
Lele22g1109 145 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Lele22g1109 145 PANTHER DNA-BINDING DOMAIN 8 134 IPR044808 GO:0003700|GO:0009873
Lele22g1109 145 FunFam Ethylene-responsive transcription factor 2 16 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1109 Lele-ChrLele22 8160737 8161174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1109 14 140 AP2-EREBP Transcription Factor Family AT3G23230 59.843 2.08e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele22g1109 AP2 1.8e-15 CL0081