Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1108 ATGGATAAAGCCAACAAGGACGTGGAGGGCGCTGGAGGCATCCGGTACCGGGGAGTGAGGAGGCGGCCGTGGGGGAAGTTTGCAGCGGAGATCCGGGACTCAACGAACCAAGGACAGAGGTTGTGGCTGGGGACTTTCGACACTGCAGAGGAAGCGGCCAGGGCATACGACAGAGCTGCTTACAACATGAGAGGCTCATTCGCAATCCTCAACTTCCCAAATGAATACCCTCTCACAGCTAATCGTTATAACACTTCAACTTCGTCATCTTCTTCTTCATCAGCTTCTTCTTCTTCTTCCTCGAGGAGCCGCCATCATGAAGTGTTCGAGTTCGAGTACTTGGATGATAGACTGCTGGAGGAGCTTCTGGACTGTGAGGACAAAACGAAGAAGGGAAAGTGA 402 0.5249 MDKANKDVEGAGGIRYRGVRRRPWGKFAAEIRDSTNQGQRLWLGTFDTAEEAARAYDRAAYNMRGSFAILNFPNEYPLTANRYNTSTSSSSSSSASSSSSSRSRHHEVFEFEYLDDRLLEELLDCEDKTKKGK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1108 133 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Lele22g1108 133 PANTHER DNA-BINDING DOMAIN 15 127 IPR044808 GO:0003700|GO:0009873
Lele22g1108 133 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Lele22g1108 133 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Lele22g1108 133 MobiDBLite consensus disorder prediction 80 105 - -
Lele22g1108 133 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Lele22g1108 133 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Lele22g1108 133 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Lele22g1108 133 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Lele22g1108 133 MobiDBLite consensus disorder prediction 80 102 - -
Lele22g1108 133 CDD AP2 15 74 IPR001471 GO:0003700|GO:0006355
Lele22g1108 133 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1108 Lele-ChrLele22 8148394 8148795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1108 15 130 AP2-EREBP Transcription Factor Family AT3G23230 61.983 4.36e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele22g1108 AP2 7.7e-17 CL0081