Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1060 ATGAAGGATTTAAAGGTGTGTGCTGATCTTCTCCTGACTGGTGCCGTTGAGTTCTCTCGCCTCCATCTCCTTCTGCAACAAGCTACCTTTCATCTTCAAAGCCTTAACAAAATGTCAGGAGAAGAAGATGTACCAGTAGCTGCTGAGGCTTCAGCACCCTTGGGTGAGAGCATGGACATCATGACTGCCTTGCAACTTGTGTTGAGGAAGTCTCTGGCCCATGGGGGTCTTGCAAGAGGACTCCATGAAGGTGCTAAGGTGATCGAAAAGCATGCTGCACATCTCTGTGTGCTTGCTGAGGACTGTGATCAGCCTGATTATGTTAAACTGGTCAAGGCACTTTGTGCTGATCATAATGTGAAATTGATGACTGTCGCCAGTGCTAAAACTCTTGGCGAATGGGCTGGTTTGTGCAAGATTGATTCTGAGGGAAAAGCAAGGAAAGTAGTTGGCTGCTCCTGTGTTGTTGTGAAGGACTTTGGAGAGGAGTCACCGGCATTAGATATTGTTCAGCAATACATAAAAGCTCAATAA 534 0.4644 MKDLKVCADLLLTGAVEFSRLHLLLQQATFHLQSLNKMSGEEDVPVAAEASAPLGESMDIMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNVKLMTVASAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESPALDIVQQYIKAQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1060 177 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 63 156 IPR004038 -
Lele22g1060 177 SUPERFAMILY L30e-like 55 176 IPR029064 -
Lele22g1060 177 PRINTS Ribosomal protein S12E family signature 67 80 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele22g1060 177 PRINTS Ribosomal protein S12E family signature 122 143 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele22g1060 177 PRINTS Ribosomal protein S12E family signature 81 97 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele22g1060 177 PRINTS Ribosomal protein S12E family signature 147 160 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele22g1060 177 FunFam 40S ribosomal protein S12 43 177 - -
Lele22g1060 177 ProSitePatterns Ribosomal protein S12e signature. 63 81 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele22g1060 177 Gene3D - 42 177 IPR029064 -
Lele22g1060 177 PANTHER 40S RIBOSOMAL PROTEIN S12 50 176 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1060 Lele-ChrLele22 7644399 7646763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1060 56 177 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.951 1.57e-64 193