Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1059 ATGTCCCGAGGCGATAGTGCAGTTCCAGCCCTGTATAACGGGTTCGCCGGTTCTCTGCATGGCGGTGGTCAGGTTTCGAATCAGACTCAGCATTTTCCTCATCCACAGTTACGAAGGGAGAGAATCGCAGAGAGAATGAAGGCATTGCAGGAGCTTGTTCCCGATGCTAACAAGACAGACAAGGCGTCGATGCTGGATGAGATCATCGATTATGTGAAGTTCCTACAGCTCCAAGTGAAGGTATTGAGTATGAGTAGGTTGGGCGGTGCCGCTGCTGTGGCTCCTCTGGTTGCTGATTTGGCCTCTGAGAAGGCAGGCGGTACGGGAGGCGACTGCATCCACGCCACTGCCAACGGTGGTGGTGGTGGGGCCCTCCCTCGGACCTCCAACGGCAACCAGACTCCACCGTCGACCTCCAACAACGACAGCATCACCATGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAAGACATGGGCTCCGCCATGCAGTACCTGCAGGGGAAGGGGCTCTGCCTCATGCCCATCTCCTTCGCCACCGCCATCTCCACAGCCACGTGTCATTCCAGGAGCCCCCTCATCAACAACAACCAGAAAGGTCCGTCGTCACCCAGCATGTCGGTCTTGACCGTGCAGTCGGCGACGGCGGGTAACGGTGCCCCGGAGGCCTCCGTGAAAGAGAGGGCCTCCGTTTCGAAGCCGTGA 705 0.5858 MSRGDSAVPALYNGFAGSLHGGGQVSNQTQHFPHPQLRRERIAERMKALQELVPDANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADLASEKAGGTGGDCIHATANGGGGGALPRTSNGNQTPPSTSNNDSITMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISFATAISTATCHSRSPLINNNQKGPSSPSMSVLTVQSATAGNGAPEASVKERASVSKP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1059 234 CDD bHLH_AtbHLH_like 38 83 IPR045239 -
Lele22g1059 234 Gene3D - 26 91 IPR036638 GO:0046983
Lele22g1059 234 FunFam Basic helix-loop-helix transcription factor 35 90 - -
Lele22g1059 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 26 75 IPR011598 GO:0046983
Lele22g1059 234 MobiDBLite consensus disorder prediction 193 219 - -
Lele22g1059 234 MobiDBLite consensus disorder prediction 123 143 - -
Lele22g1059 234 MobiDBLite consensus disorder prediction 193 234 - -
Lele22g1059 234 Pfam Helix-loop-helix DNA-binding domain 36 76 IPR011598 GO:0046983
Lele22g1059 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 29 86 IPR036638 GO:0046983
Lele22g1059 234 MobiDBLite consensus disorder prediction 118 143 - -
Lele22g1059 234 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 34 182 - -
Lele22g1059 234 SMART finulus 36 81 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1059 Lele-ChrLele22 7620583 7623296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1059 31 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 60.909 6.92e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele22g1059 HLH 3.8e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1059 22 7620583 7623296 Lele24g1036 24 7707469 7710151 hybridization