Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1054 ATGTCAGGTGTAGCTCTCAAGGCAAATCTCACAGGACAAGATTGTAAATTCACTTACCGAAATTACCCTTCTCTGGGATTACGACACACGTGGCTCCTCCCCAAGTGTCCAGAAACTGAATTCGGGTTTCCGAGCTTCGAGGACATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCTCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAACTATAAAGTCTACATGGATGGGATTATTGCTCAACTTCGAGAGCACTTCCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACGAAGAGTCAGATGGCTAACATCTTGTCAGAGTATGACATGACTATTATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAGCGAAAGTTGGCTCTCACTTGGGCAGCATAATATTCTGTTGATGCACTGTGAACGTGGTGGCTGGCCTGTTTTGGCTTTCATGTTGGCTGCACTTTTGATTTATCGAAAGCAATATAGCGGAGAACAGAGGACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCATCTTTTGTCACCGTTAAATCCAATTCCTTCCCAACTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAGATTGGCCTCCATTGGACAGGGCGCTCACGTTGGACTGCGTCATTCTCAGATGTTTCCCTGATTTTGATGGGGAAGGTGGGTGTTGTCCAATATTTAGAATTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAATCCTGTACTCAACACAGAAAGACAAAACCGTCCGATTTTACAAGCAGGGAGAGTGTGAACTAATTAAAATTGACATCAACTGCCATATACAAGGTGATGTTGTGATTGAAAGCATTAACTTGACCAGTGACATGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACAGCTTTTATTAGGTCTAATATATTGATGCTTAACCTGGACGAAGTTGACATTTTATGGGATTCTAAAGATCAATTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTTATTGCGGATGGTACCTCATGGCTTGAGGAGAAGGAGGGACTACCAGTGGAAGCATTTGCCAAAGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGCTGCACTAAATGTACTCCAACAACTTAGTGCGTCAGTGCATGACAAGTTGGATATAATTTCTGCTCAGCAGCATGATGCAGGATCTTTGTTGCATGAAAAAGATCCTAAAGTTCCTCAGGGAAAAAAGAGTGAAGCAAAAAGGTTATTGCCCATAAATAATGAATCCCCGGTTAGTGATTTGAGTAATAAAGTGGATGAGCCTATCAAGACCGGTGCTTCTCCAAAACTATCTAGAAACTCTGACATTATCTATCAGAAGATGCCCATTATGTCTATGAGAACCTCAGAGTCCAGTAAACATGTGAAGAGTTCTACAAAGCTTGATGTGAAAGCACAGGTGGATGATCTTGCCTTTTCTAGTTCTCTAGATACTTCTAGTGAATCATTTTCACCAAAAACACCTCCACAGAATCTTTCCTTGACTAGTAATTCTGAAAACGTTCGTGATACTCAACCCAACGCAAAATTACCTTCTCATCTTTCCCCTCTAGGACCAGGTTATCCTGTTACTGGAGAAATTAAAGCCCAATCACAAGACAGAAGTGAGTCATCGAACTTTAGTTCAACATCTGGAACTTCATTATCAGGTTCCTTTCCAAATAAGCTGCCTCTTGATTCTGCTTCCCATTTTTCAGCTTCATCAATGACTTCAACTCAGCCATCTCCTTCCCCTACAACCCCTCTGAAGGAGATTCTACCTGTTAGAACTAGACCTGCTTCATCCAATTCACAAGCTCCAACACCACCCACACCCCCAACTCCTCCTCAAAAGGAACATAAACTGGTTAGAGCTGTGCCTCCCCCACCGCCACTGCCTCCACCACCACTTCCACAGAAAGAACAATCACTGGTTAGAGTCATGCCGCCTCCACCCCCACCAAAGGAGGAACCACGTTGTCAACTTGGACCCCCTCCTCCCCAACCCCCTCCTCTAAGGGAGGAGCCTAAGGTTAAAACTGGACCACCACCCCCTCCACCACCTCCTCTAAAGGTGGAGCCACCTGTTAGCGCTAAACCTCCTCCTCCTCCTCCTCCTCCACGTCTTCCTGGGAAAGCTGATTCTACCACAGTATCACCGCCGCCACCTCCTCCTCCCCCTGCTGCAGCACTCTCCTCCAAGCACCCTAATCCTTCATTGCAGAATTCTACATCTGTTCCTGCTGCTCCTAATGCTCCATCACCTCCAGTTCCCTTTAGTGAAGGAGATGGAAATATTGCGTTTAGTACAACAGGACCCCGAGGACGAATTCTATCTCGTACAATAAGTAGTACCAAAAATCAAAATAAAAAGATGAAGCCCTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTCGAGAGTCTCTTCTCAGCTGCAGCCCCAAGTTCAGGCTCCAAGATAGTAGGTGCAAAAAGTTCAGCGGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTACCATTACATGATTTGATGAGCTCAGTGCTAGCACTAGAGGACTCGGCACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGCTATACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCACGGGTAGAGTCAAAACTCAGAGTGTTTTCATTCAAGATTCAGTTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTTGATGCTGCTGTAGAAGAGATTAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCTATTGGATTTAGATTGGATAGCCTTCTTAAACTCACTGAGATGCGAGCACGGAACAAGAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCAGAAGTTCTAGACTTCTCCAAGGACCTTGCTAACCTAGAGCCTGCAGCAAAGATCCAATTGAAGTTTATGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTTTCAATCTCAGAAAATGATGGTCCTATATCTGAGACATTCCGCAAGACTTTGAAAAATTTCCTCCGTTTGGCTGAAGCTGATGTCCGATCACTGGCTTCATTATATTCTGGCGTGGGTAGGAAAGTGGACTCGTTGATTGTTTATTTTGGTGAAGATCCGGCTCGCTGCCCTTTTGAACAAGTTGTGACAACTTTGCTCAACTTCACGAGGATGTTCTACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAATGAAGAAATCATCTGATAGTGACAAAAAGACATGTGAATCACAAAGGATACTGCCAACCGCAATCCGGAACGAACAGAATGTAGGAGCTCATTTTACTGCTCAAGTCAGCAAAGTGGTAGAAGATCTCGCAGGATGTTGTTCTTTGTCAGCCAACTTGTATATATCTTCGCTCAGACAAATGTAA 3891 0.441 MSGVALKANLTGQDCKFTYRNYPSLGLRHTWLLPKCPETEFGFPSFEDMTLLRKLFFRKPPDGLLEICERVYVFDCCFMTDAWNEENYKVYMDGIIAQLREHFPDASILVFNFRQEETKSQMANILSEYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNILLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLHLLSPLNPIPSQLRYLQYISRRNVAIDWPPLDRALTLDCVILRCFPDFDGEGGCCPIFRIYGQDPFLADKTPKILYSTQKDKTVRFYKQGECELIKIDINCHIQGDVVIESINLTSDMDHERMMFRVMFNTAFIRSNILMLNLDEVDILWDSKDQFPKDFRAEILFSEMDAAAAVIADGTSWLEEKEGLPVEAFAKVQEIFNHVDWLNPKADAALNVLQQLSASVHDKLDIISAQQHDAGSLLHEKDPKVPQGKKSEAKRLLPINNESPVSDLSNKVDEPIKTGASPKLSRNSDIIYQKMPIMSMRTSESSKHVKSSTKLDVKAQVDDLAFSSSLDTSSESFSPKTPPQNLSLTSNSENVRDTQPNAKLPSHLSPLGPGYPVTGEIKAQSQDRSESSNFSSTSGTSLSGSFPNKLPLDSASHFSASSMTSTQPSPSPTTPLKEILPVRTRPASSNSQAPTPPTPPTPPQKEHKLVRAVPPPPPLPPPPLPQKEQSLVRVMPPPPPPKEEPRCQLGPPPPQPPPLREEPKVKTGPPPPPPPPLKVEPPVSAKPPPPPPPPRLPGKADSTTVSPPPPPPPPAAALSSKHPNPSLQNSTSVPAAPNAPSPPVPFSEGDGNIAFSTTGPRGRILSRTISSTKNQNKKMKPLHWLKISRAVQGSLWHEAAKSGEASKAPEIDMSELESLFSAAAPSSGSKIVGAKSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLHDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFQSQVSDLRKSLNIVDAAVEEIRNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTEMRARNKKMTLMHYLCKVLADKLPEVLDFSKDLANLEPAAKIQLKFMAEEMQAISKGLEKVIQELSISENDGPISETFRKTLKNFLRLAEADVRSLASLYSGVGRKVDSLIVYFGEDPARCPFEQVVTTLLNFTRMFYKAHEENCKQLELEMKKSSDSDKKTCESQRILPTAIRNEQNVGAHFTAQVSKVVEDLAGCCSLSANLYISSLRQM 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1054 1296 ProSiteProfiles C2 tensin-type domain profile. 247 384 IPR014020 -
Lele22g1054 1296 PANTHER FORMIN-J 49 740 - -
Lele22g1054 1296 SMART it6_source 849 1295 IPR015425 -
Lele22g1054 1296 SUPERFAMILY Formin homology 2 domain (FH2 domain) 862 1238 - -
Lele22g1054 1296 MobiDBLite consensus disorder prediction 672 799 - -
Lele22g1054 1296 SMART PTEN_C2_2 245 383 IPR014020 -
Lele22g1054 1296 MobiDBLite consensus disorder prediction 455 508 - -
Lele22g1054 1296 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 235 IPR029021 -
Lele22g1054 1296 Pfam Formin Homology 2 Domain 851 1221 IPR015425 -
Lele22g1054 1296 Gene3D - 244 387 - -
Lele22g1054 1296 MobiDBLite consensus disorder prediction 801 815 - -
Lele22g1054 1296 Gene3D Protein tyrosine phosphatase superfamily 48 239 IPR029021 -
Lele22g1054 1296 MobiDBLite consensus disorder prediction 602 653 - -
Lele22g1054 1296 MobiDBLite consensus disorder prediction 549 585 - -
Lele22g1054 1296 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 249 384 IPR035892 -
Lele22g1054 1296 ProSiteProfiles Formin homology-2 (FH2) domain profile. 849 1247 IPR015425 -
Lele22g1054 1296 MobiDBLite consensus disorder prediction 455 471 - -
Lele22g1054 1296 Pfam C2 domain of PTEN tumour-suppressor protein 248 383 IPR014020 -
Lele22g1054 1296 MobiDBLite consensus disorder prediction 549 844 - -
Lele22g1054 1296 Gene3D Formin, FH2 domain 846 1232 IPR042201 -
Lele22g1054 1296 Coils Coil 1222 1242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1054 Lele-ChrLele22 7538641 7547780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1054 814 1245 Protein tyrosine phosphatase (PTP) family AT5G58160 68.879 0.0 605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1054 22 7538641 7547780 Lele23g1011 23 15737088 15746533 hybridization
Lele22g1054 22 7538641 7547780 Lele24g1031 24 7628046 7636271 hybridization