Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1048 ATGGCTGACCGTGAGAGCTCCGGAGCTCTCATAGACGGTAATTCTGAACTGCAAGATCACAACGAATCAGCAGAAGAAGGAAAAGGAGAGGAATTAAACCGAGTCTCTGAAGAACGGCCTAGCGAGTCGCAGCGAGGCGACTTGCAGAATTCTGAACCTTCCCGGGAAGCAGAGCAACCGGAGCCTAATTCGGTAACCCTAGCTGTGCCCACTTTGCTTGAACCCAAAGAGAGAGATCAGAGTGCTGAATTGCAGGCGAGCTCTACTACGCAGGAGGCCTTGAAAGGCGAAAATAAGGAGCCAGTTGGACCTTCTGGCAAGGAACTTACTGAAAGAGAATCAGTCCAGACAACTCAAACACAGATAGAAAATCAACTCCAGTTGGCGGTGTGTTCAAGTGCATTGTCGGAACTGTCACCAACATCTGTAACACAATCTTTATCATCTGCTCCTAGTCCAGCTTTACCAGAACAAAGACAGTCTTCTCCAAAGGTTAATAATGCAATTATGCTGCTGGAAGTAGACAAGGAAAAGCCTTCTCGTCATAATACCTTATCTCCTGTTTCTGTTGTGAGGGCATCCACGTCTGATGGATACAATTGGCGGAAGTATGGTCAGAAGCAAGTTAAAAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTGTGCTAAGAAGATTGAATGTTGTGACCATTCAGGCCAAGTAGTAGAGGTTGTATATAAAAGTCAACACACTCACGATCCACCACGGAAGACTAACTCCGGTAGAGAAAGTAAGTTTGCATCATCCAAACAGCCTAATTTGGAGAACATTGTTCTAGAGAAGCCCATCAGAGTGCTCAGTGATTCAAATCCATGCCCTTCTTCAAAGGAACCTCCACAAGGAGCACCATGCAGTGCTGATAGGAAAAGACAAAACTCATCTGATCAAAGTGATAATGGTAAAGTTGACTTGAAGGATGATCATGTTATCAAGACAGAGCCGAAGAAAAGAGTGAAGAAGGGTGACTATACATCCCTGGATTCTCCAGTAAAACCTGGAAAGAAACAGAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCAGGTGATGGATATAGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAATCCTCATCCTAGAAACTACTACAGATGCACTTCAGCTGGATGTCCTGTCCGTAAGCACATCGAGACTGCTGTAGATAACTCTAATGCAGTAATCATTACATACAAGGGAGTTCATGACCATGACATGCCTGTGCCTAAGAAACGGCATGGCCCACCAAGTGCCCCTCTTGTGGCTGCAGCAGCACCTGTTTCAATGAACAATTCACAGCAATTCAAGAAAACAGACAAACTGCAGAAGCAAAAATCTTCAATGCAGTGGTCGGTGGACACAGAAGGGGAATTAACTGGGGAAGCCTTGGAACTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACTCTCTTGAGCATTGGTTTTGAAATAAAACCTTGCTGA 1527 0.4506 MADRESSGALIDGNSELQDHNESAEEGKGEELNRVSEERPSESQRGDLQNSEPSREAEQPEPNSVTLAVPTLLEPKERDQSAELQASSTTQEALKGENKEPVGPSGKELTERESVQTTQTQIENQLQLAVCSSALSELSPTSVTQSLSSAPSPALPEQRQSSPKVNNAIMLLEVDKEKPSRHNTLSPVSVVRASTSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGQVVEVVYKSQHTHDPPRKTNSGRESKFASSKQPNLENIVLEKPIRVLSDSNPCPSSKEPPQGAPCSADRKRQNSSDQSDNGKVDLKDDHVIKTEPKKRVKKGDYTSLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPVSMNNSQQFKKTDKLQKQKSSMQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1048 508 FunFam WRKY transcription factor 353 429 - -
Lele22g1048 508 MobiDBLite consensus disorder prediction 310 343 - -
Lele22g1048 508 ProSiteProfiles WRKY domain profile. 363 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 SUPERFAMILY WRKY DNA-binding domain 364 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 MobiDBLite consensus disorder prediction 1 121 - -
Lele22g1048 508 MobiDBLite consensus disorder prediction 260 274 - -
Lele22g1048 508 Gene3D WRKY domain 186 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 Gene3D WRKY domain 353 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 MobiDBLite consensus disorder prediction 18 54 - -
Lele22g1048 508 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 132 456 IPR044810 GO:0003700
Lele22g1048 508 SUPERFAMILY WRKY DNA-binding domain 194 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 MobiDBLite consensus disorder prediction 246 348 - -
Lele22g1048 508 ProSiteProfiles WRKY domain profile. 196 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 MobiDBLite consensus disorder prediction 139 166 - -
Lele22g1048 508 SMART WRKY_cls 368 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 SMART WRKY_cls 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 Pfam WRKY DNA -binding domain 197 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g1048 508 Pfam WRKY DNA -binding domain 370 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1048 Lele-ChrLele22 7468373 7474298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1048 121 508 WRKY Transcription Factor Family AT4G30935 56.030 4.97e-132 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele22g1048 WRKY 1.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1048 22 7468373 7474298 Lele22g1048 22 7468373 7474298 ECH
Lele22g1048 22 7468373 7474298 Lele23g1017 23 15806103 15813398 hybridization
Lele22g1048 22 7468373 7474298 Lele24g1023 24 7560780 7566663 hybridization