Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1043 ATGGCGGCATTGAAAGGCCACGTTCTGCATCTCTTGTTGCTGCTGCTGCTGAGTCTGTACGCGGTTTCGGCGGCGGCGTCCGGCGGTGTTCCGAAAGAGCAAGAGGACGATCGAATCTCGGCCCTTCCTAGACAGCCGGCGGTGCCATTTGCTCAGTTCTCCGGTTACGTGACCGTGAACGAGAAGCATGGCCGAGCACTGTTCTACTGGTTGACGGAGGCTTACACTTCCCCTCACACCAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCGGGTTGCTCATCAGTGGCATATGGGGCATCAGAGGAAATTGGACCATTCCGGATAAATAAAACTGGTTCTTCCTTGTATCTTAACAAGTATTCATGGAACAGAGAAGCAAATATTCTCTTTCTTGAATCGCCTGCTGGTGTAGGTTTCTCCTACACAAATACAAGCTCTGACCTCAAAACTTCTGGGGACGAAAGGACAGGTACAACTCAGGATGCTCTAATTTTTCTAATCAGATGGATGTCAAGGTTCCCACAATATAAGTACAGAGACTTTTACATTTCTGGAGAGAGTTATGCAGGACACTATGTTCCCCAGTTGGCTCAAAAAATTTACCATTATAATAAAGCCAATCCCCGTATCATTAATCTCAAAGGTTTCATTGTGGGAAATGCTGTGACAGATAACTACTATGATGGGATTGGAACTGTGACATATTGGTGGAGCCATTGTATGATATCTGATAAATCATACAAAACTATCCTCAAACACTGCAATTTCACGGCAGGGAAAACATCTAAAATATGTGATGATTCTGTGCGTTATGCAATTAACCATGAATTTGGAAACATTGATCAGTACAGCATTTATACCCCTACATGCGGGACCAACAGTACTGCACAGTACTTAAGGCTCAAGAGTACAATATTACATAGGATTTCAGGGTACGATCCATGTAACGAAAATTATGCAGAGAAATTCTATAATCTCCCTGAAGTGCAAAAAGCAATGCATGCAAATGTTACAGGCATTCCTTACAAATGGACTGCATGCAGTGATGTGCTCTTAAAATACTGGAACGACTCTGCAGTTTCTGTATTGCCCATTTACAAAGAGTTAATTACAGCTGGTTTGAGAATCTGGGTTTTCAGTGGGGACACAGATTCAGTGGTTCCAGTGACTGCCACTAGATTTTCCCTCAACAGCCTCAAACTCAAGATTAATACTCGTTGGTATCCATGGTACACTGGTGGACAGGTAGGTGGATGGACAGAGGTGTATGATGGACTAACTTTTGCTGCAGTACGAGGAGCAGGGCATGAGGTGCCATTGTTTCAGCCTAGAAGAGCTTTTACTCTGTTCAAGTCATTCTTGGAAGGAAAGAAGCTTCCAACATCTTGA 1392 0.4418 MAALKGHVLHLLLLLLLSLYAVSAAASGGVPKEQEDDRISALPRQPAVPFAQFSGYVTVNEKHGRALFYWLTEAYTSPHTKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNKYSWNREANILFLESPAGVGFSYTNTSSDLKTSGDERTGTTQDALIFLIRWMSRFPQYKYRDFYISGESYAGHYVPQLAQKIYHYNKANPRIINLKGFIVGNAVTDNYYDGIGTVTYWWSHCMISDKSYKTILKHCNFTAGKTSKICDDSVRYAINHEFGNIDQYSIYTPTCGTNSTAQYLRLKSTILHRISGYDPCNENYAEKFYNLPEVQKAMHANVTGIPYKWTACSDVLLKYWNDSAVSVLPIYKELITAGLRIWVFSGDTDSVVPVTATRFSLNSLKLKINTRWYPWYTGGQVGGWTEVYDGLTFAAVRGAGHEVPLFQPRRAFTLFKSFLEGKKLPTS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1043 463 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
Lele22g1043 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 444 IPR001563 GO:0004185|GO:0006508
Lele22g1043 463 Gene3D - 363 457 - -
Lele22g1043 463 FunFam Carboxypeptidase 363 457 - -
Lele22g1043 463 Gene3D - 316 353 - -
Lele22g1043 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Lele22g1043 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Lele22g1043 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Lele22g1043 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Lele22g1043 463 FunFam Carboxypeptidase 312 460 - -
Lele22g1043 463 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Lele22g1043 463 Pfam Serine carboxypeptidase 46 457 IPR001563 GO:0004185|GO:0006508
Lele22g1043 463 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Lele22g1043 463 FunFam Carboxypeptidase 33 293 - -
Lele22g1043 463 SUPERFAMILY alpha/beta-Hydrolases 33 461 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1043 Lele-ChrLele22 7408462 7415469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1043 321 460 Calmodulin-binding Proteins AT2G22960 29.078 1.21e-14 70.5