Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1039 ATGCCGAGTCGCTGTGAAATCTGCTGCGAACTACTCATCGCCATCTTGCTCCCTCCCCTTGGGGTTTGCTTCCGCCATGGCTGCTGCAGCGTGGAATTCTTTATCTGCTTGATCCTGACCATACTAGGCTATGTTCCAGGAATAATTTATGCCCTTTATGCCATTGTTTTTGTTGATCGTGACCAGTACTTTGACGAATATAGGCGTCCTCTGTATTCTGCATAG 225 0.4756 MPSRCEICCELLIAILLPPLGVCFRHGCCSVEFFICLILTILGYVPGIIYALYAIVFVDRDQYFDEYRRPLYSA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1039 74 Pfam Proteolipid membrane potential modulator 9 56 IPR000612 GO:0016020
Lele22g1039 74 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 60 IPR000612 GO:0016020
Lele22g1039 74 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1039 Lele-ChrLele22 7394897 7395451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1039 1 74 RCI2 Gene Family AT4G28088 79.730 1.69e-40 125