Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1032 ATGGAAGCTAGCACTGGACTTTTTGCAGGGTCTCACAACAACAACGAGCTTGTGGTCATACAAGGACATGAAGAAGAGCATAAGACAGTGAAGAACTTAGATGGTCAGCTATGTGATATATGTGGTGATTCTGTGGGGTATACAGTGGATGGAGATTTGTTTGTGGCCTGTGAAGAGTGTGGTTTCCCTGTTTGCAGGCCATGTTATGAGTATGAAAGAAGAGAAGGGACTCAAGTTTGCCCTCAGTGCCAGACCAGATACAAGCGAGTCAAAGGAAGCCCAAGGGTTGAGGGAGATGAAGATGAAGATGACGTGGATGATATTGAACATGAGTTCAAAATGGAAGAAGAGAAGCACAAGCTCATGATAGGCCGTGGAGATGATGACGAGAATGCTAAATTACCAGTAGTAATAGCCAAGGTTAATGGAGAGATTCCCACTATTGGAGAACCTGGAAAAGCAAAGTTGGATGAGAAGACACAGATAACAGATGACTGGAAGATGAATCAAGGAAATCTGTGGCCTGAAACTGATGCATCAGTTGATCCTGAAAAGGCCATGAGAGAGGAAGCTAGGCAACCACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTACAGGATGATGGTGGCGGCTCGGCTTATGATTCTACTATTGTTCCTTCAGTATAGAGTCCTACATCCGGTGCCTGACGCTGTTGGACTCTGGCTTACATCTGTAATATGTGAAATATGGCTTACATTGTCTTGGATAATAGATCAGATTCCCAAATGGTTTCCCATTGACCGGGAGACATACCTTGATCGGCTTTCACTCAGGTTTGAACCAGAGAACAAGCCGAATTTGTTTCCTCCAATAGATGTCTTTGTCACTACAGTGGACCCAATTAAGGAACCTCCAATAGTTACAGCTAATACTGTTCTTTCAATCTTGGCCATGGATTACCCTGCTAGTAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCCCTGCTTACATTTGAAGCTCTCCAAGAAACTGCAGAGTTTGCACGGAAGTGGGTGCCCTTCTGCAAAAAATATTCCATAGAGCCTCGAGCACCGGAGAAGTACTTCTCAGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCTACTTATGTCAGAGACCGCCGTACCATGAAGAGAGAATATGAAGAATTCAAGGTTAGGATAAATGCACTTGTGGCTAAATCCATGAGAGTTCCCCAAGAAGGGTGGACTTTGCAAGATGGGACACCATGGCCGGGAAACAATACCAATGATCACCCAGGTATGATACAAATTCTTCTCGCTCGGAGCGGAGGCGTTCAAGGAAACGAACTTCCGTGTCTTGTCTACCTGTCTCGTGAGAAAAGGCCAGGGTTTCAACACCACAGCAAAGCCGGAGCCTTGAATGCATTGCTTCGGGTATCTGCATTGCTAAGCAATGCTCCTTTTGTGCTGAACTTGGATTGCAATCACTATGTGAACAATAGCAAGGCTGTGAGAGAGTCCATGTGTTTCTTCATGGACCTACAAGTTGGAAAGAGCATTTGCTTTGTCCAGTTCCCGCTAAGATTCGATAGCCTCGATAAGCACGATCGTTATGCCAACAGAAATACTGTTTTATTCGATATAAACTTGAGGTGCCTAGATGGAATTCAAGGACCTATTTATATTGGTTCAGGATGTATTTTCAGGAGGAAAGCATTAAATGGAAGTGATCCTCCGAAGACTTCAAAGAGCCCGAAAATGGTAGGCTGTGGCTGCTGCCCTTGTTTTGGAACACGCAAGAAGCTACAAGTGCACTCTAAGCATGATGATGGCAATGAAGATGATCCAACCATGACAGGAACAGAAGAAAACAAGGAGCTTTTAACATCAGAGATGAATTTTGAAAATAAATTTGGGAAATCTGCAGTTTTTGTTAACTCTTCCGTAATGGAAGAGTGTGGTACTCCTTCTACCTCTAATCAGGCAGCCTTACTTAAAGAAGCCATTCACGTCATGAGTAGCAGCTACGAAGACAGAACCCTATGGGGATACGAGGTAGGTTGGAACTATGGATCTATATCATCAGATATTCTGACAAGTTTCAAAATGCACTCTCTTGGTTGGAGATCTGTGTATTGCATGCCAGAAAGACCTGCTTTTAGGGGAACCGCTCCGATCAACCTTTCCGATCGACTCAGTCAGGTGCTTAGATGGGCAGTTGGATCACTTCAGATCCTTTTCAGCCGCCATTGCCCAATATGGTACACCTTAGGTGAAGGAAAACTTAAGGGGCTTCAAAGAATTGCCTATATCAACAGCACAGTTTACCCTTTCAGCTCAATACCTCTTCTAGTATATTGTCTCCTTCCAGCCGTCTGCCTGCTCACAGACAAGTTCATCACACCTTCGATAAGCACCTTGGCAAGTCTTCTCTTTATTGCACTGTTCATCTCAATCTTTGCATCAAGCATTCTTGAGTTAAGATGGAGTGGAGTCACACTTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTTAGTGGCAGCATCTCAACACACATCTTTGCAATTGTCAGAAACTTTCTGAAATCTGTGTCCAAAGTTGATACTAACTTCGGCGTCGTATCGAAAGTACCAGACGATGGCGAATTCAATGATCTCTACACCTTTAGATGGACAGCACTGCTAATACCTCCAACCACTATCATAATCATCAACCTTGTTGGTATTGTAGCTGGGTTTACAGATGCAATAAACAGTGGTGGACATTCTTGGGGAGCATTACTGGGAAAACTCTTCTTCTCATTCTGGGTTCTGGTTCATCTTTACCCATTCCTCAAAGGGATGATGGGAAAACAGAACAGAACACCAACCCTTGTTATCATATGGTCAGTGCTTTTGGCTTCTATCTTCTCTTTGCTTTGGGTGAGAATTGATCCTTTTGTGTTGAAAACTAAAGGACCTGATGTTAAGCAGTGTGGAATCAGTTGCTGA 2994 0.4369 MEASTGLFAGSHNNNELVVIQGHEEEHKTVKNLDGQLCDICGDSVGYTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRVKGSPRVEGDEDEDDVDDIEHEFKMEEEKHKLMIGRGDDDENAKLPVVIAKVNGEIPTIGEPGKAKLDEKTQITDDWKMNQGNLWPETDASVDPEKAMREEARQPLSRKVAIPSGRLSPYRMMVAARLMILLLFLQYRVLHPVPDAVGLWLTSVICEIWLTLSWIIDQIPKWFPIDRETYLDRLSLRFEPENKPNLFPPIDVFVTTVDPIKEPPIVTANTVLSILAMDYPASKISCYVSDDGASLLTFEALQETAEFARKWVPFCKKYSIEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINALVAKSMRVPQEGWTLQDGTPWPGNNTNDHPGMIQILLARSGGVQGNELPCLVYLSREKRPGFQHHSKAGALNALLRVSALLSNAPFVLNLDCNHYVNNSKAVRESMCFFMDLQVGKSICFVQFPLRFDSLDKHDRYANRNTVLFDINLRCLDGIQGPIYIGSGCIFRRKALNGSDPPKTSKSPKMVGCGCCPCFGTRKKLQVHSKHDDGNEDDPTMTGTEENKELLTSEMNFENKFGKSAVFVNSSVMEECGTPSTSNQAALLKEAIHVMSSSYEDRTLWGYEVGWNYGSISSDILTSFKMHSLGWRSVYCMPERPAFRGTAPINLSDRLSQVLRWAVGSLQILFSRHCPIWYTLGEGKLKGLQRIAYINSTVYPFSSIPLLVYCLLPAVCLLTDKFITPSISTLASLLFIALFISIFASSILELRWSGVTLEEWWRNEQFWVSGSISTHIFAIVRNFLKSVSKVDTNFGVVSKVPDDGEFNDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGGHSWGALLGKLFFSFWVLVHLYPFLKGMMGKQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1032 997 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 401 578 IPR029044 -
Lele22g1032 997 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 278 381 IPR029044 -
Lele22g1032 997 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 111 IPR013083 -
Lele22g1032 997 Pfam Cellulose synthase 289 991 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele22g1032 997 FunFam Cellulose synthase 20 111 - -
Lele22g1032 997 SUPERFAMILY RING/U-box 23 108 - -
Lele22g1032 997 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 192 964 - -
Lele22g1032 997 ProSiteProfiles Zinc finger RING-type profile. 38 84 IPR001841 -
Lele22g1032 997 SUPERFAMILY Nucleotide-diphospho-sugar transferases 300 820 IPR029044 -
Lele22g1032 997 CDD mRING-HC-C4C4_CesA_plant 36 86 - -
Lele22g1032 997 Pfam Zinc-binding RING-finger 28 105 IPR027934 -
Lele22g1032 997 Coils Coil 387 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1032 Lele-ChrLele22 7340175 7345235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1032 1 997 Cell Wall Biosynthesis AT5G17420 67.282 0.0 1441