Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1026 ATGGGTTTGTGCAGATTTTCATTATTTGCGTTCTTCTCTGTGGTCGTTGTTCATTTAGGAGTTCATGGGGAAGAAAATGCCGACCTGGTGTATGATAAAAGTTCTCTGATATCATTCATGAGGGGCATTGTTTCTGACCCAAAGAACGCTCTAGCGAGCTGGAAATCTCCTGATATTCATGTCTGTAATTGGTCAGGGATAAGATGCAACAATGCAAGTTACAGAAGAGTCATAGAGTTTGATCTCAATGGAAAATCACTAGGAGGCACAATTTCCCCTGCTATTTCCAACCTCACTTCCTTGAAAATTCTAGATCTTTCTGAGAATTTCTTTGTGGGTCATATTCCAAAAGAGTTAGGCTTCTTAACTCAACTGGAGCAACTCAGTTTATCTTGGAATTTTCTTCAAGGAGAAATTCCAACTGAGTTGGGTTCATTTCATAACTTATATTACCTTGACATGGGAAGCAACCAGCTTGAAGGTGAGATTCCAGAATCACTTTTCTGTAATGGGTCTTCTTCCTCATTGAGGTATATAGATCTCTCAAACAATTCCTTAATGGGACATATCCCATTGAACAATAAGTGCATGCTTCTAGAAGTTAGGTTCCTCTTACTTTGGTCTAATAAGCTTGTAGGCCAAATTCCTTTAGCTCTTTCTAACTCTACACAGCTAAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGTGAGTTACCACATGAGATTGTAAGTTGGCCTGAACTACAATTCCTTTATTTGTCTGATAATGACTTTGTTAGCCATGATGGAAACACAAATCTGGAACCTTTCTTTGCTTCTTTGAGAAATTTATCTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAACATTGGTGACCTTCCTAACAGCCTTGTTCAGCTTCACCTTGATAACAATCTCATTTATGGTCCTATACCTCCTCAAATATCGAACCTTGTTAACCTGACTCTACTGAATTTTTCTAGTAATCTGCTAAATGGATCTGTTCCTTCTAGCCTATGGAAGATGGGAAAGCTTGAGAGAATCTATTTGTCCAATAATTCACTATCTGGTGAGATTCCTTCAGAACTTGGTGGAATTCAACATCTGGGCCTTCTAGACTTGTCAAGAAACAAGCTTTCTGGTTCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTGTATGAAAACCGGCTTTCTGGAACGATTCCACCGAGTCTTGGAAAATGCGTCAATTTGGAGATTTTGGACCTATCTAGAAACAGAATTTCCGGGGTGATTCCTACAGGAGTCGCCGCCTTGACTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTGAATGGCCCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAATTATTGATTTATCTAACAACAATCTCTCAGGAAGAATCCCACCTCAGCTTGAAAGCTGCATAGCTCTAGAATACCTTAACCTTTCTGGTAACTCCTTAGAGGGCCCTCTTCCTTTTTCATTAGGCCAATTGCCTTATATAAAGGCACTTGATGTCTCTTCAAATAGGTTAACTGGGCCAATACCAGAGTCCCTTCTGTTATCATCCTCTCTGAAGAAACTCAATTTCTCCTTCAACAAATTCTCAGGGAATATACCAAACAAGGGAGCAATTTTATCTCTCTCCATAGACTCTTTCCTTGGAAATGATGCTCTATGTGGTTCTATAAAAGGGATGAAAAGCTGCCACAAGAAACACGGCTATCACTTTGTTCTCCTTATAATTCCAGTGTTTTTATTTGCTACTCCCCTCTTGTGCATGTTCGGCTACCGATTGGGACACATGGTGAAATTTCGAAGGCGACTGGAGATATTTGGCAGAAATGACTATGAGAGTGATGAGGAGGAAACAAAGGAGCTAGAGTACCCAAGCATTTCATATAAAAAACTTATTGAAGCCACTGGAGGCTTCAGTGCTTCAAGCTTAATTGGTTCAGGAAGTTTTGGGCATGTCTACAAAGGAGTCCTTAGAGATAACACCAGAATAGCAGTGAAGGTGATAGATACCGCCACAGCGGGTGAATTTTCAGGGAGTTTTAGAAGAGAGTTTCAAATTTTGAGAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAAAGTTTAAGGCTCTTGTTCTTCCCCTAATGCCAAATGGAAGCCTTGAGAGGCACCTATATCCAAGCCATGGGTTGAGCCAAAGGTTGAATTTAGTTCAGTTAGTGAGGGTATGTAGTGATGTGGCTGAAGGAATGGCCTATTTGCACCATTACTCACCAGTAAGAGTGATCCACTGCGATCTCAAGCCGAGCAATATACTTCTCGACGACGATATGACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTCGTGAAAGGCGATGACAGTATTGACTCGAATAATAATAGCTCGGCATCTCTCAGTTCAACACGTGGCTTGTTATGTGGTTCTGTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAACACAAGGTGATGTATACAGTTATGGAGTATTACTACTAGAAATAGTGACAGGTAGGCCTCCAACAGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTGAAGAGACAGTACCCATACAAGCTTGACAACGTTGTTGAGAAGGCATTACAAAGGTTGTCACATTCACATTCTGGGAAACAACATGACAGTAGCAAAATCTGGCAAGATGTTGTACTTGAACTCATAGAACTGGGACTTCTCTGCACACAGTATAATCCTCTGACAAGGCCAAGCATGATGGATGTGGCCCAAGAAATAGGAAGGTTGAAGGACTACTCGTGTAATTCATCTTCTTATGATGAAACAGTCAACTCTAAGGTTGATGATTCCTTTTGTAGTGAAGATAATTTACTTGAAAAGTAA 2988 0.4046 MGLCRFSLFAFFSVVVVHLGVHGEENADLVYDKSSLISFMRGIVSDPKNALASWKSPDIHVCNWSGIRCNNASYRRVIEFDLNGKSLGGTISPAISNLTSLKILDLSENFFVGHIPKELGFLTQLEQLSLSWNFLQGEIPTELGSFHNLYYLDMGSNQLEGEIPESLFCNGSSSSLRYIDLSNNSLMGHIPLNNKCMLLEVRFLLLWSNKLVGQIPLALSNSTQLKWLDLESNMLSGELPHEIVSWPELQFLYLSDNDFVSHDGNTNLEPFFASLRNLSNLQELELAENNLGGKLPSNIGDLPNSLVQLHLDNNLIYGPIPPQISNLVNLTLLNFSSNLLNGSVPSSLWKMGKLERIYLSNNSLSGEIPSELGGIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENRLSGTIPPSLGKCVNLEILDLSRNRISGVIPTGVAALTSLKLYLNLSSNNLNGPLPLELSKMDMVLIIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPFSLGQLPYIKALDVSSNRLTGPIPESLLLSSSLKKLNFSFNKFSGNIPNKGAILSLSIDSFLGNDALCGSIKGMKSCHKKHGYHFVLLIIPVFLFATPLLCMFGYRLGHMVKFRRRLEIFGRNDYESDEEETKELEYPSISYKKLIEATGGFSASSLIGSGSFGHVYKGVLRDNTRIAVKVIDTATAGEFSGSFRREFQILRRTRHRNLIRIITICSKPKFKALVLPLMPNGSLERHLYPSHGLSQRLNLVQLVRVCSDVAEGMAYLHHYSPVRVIHCDLKPSNILLDDDMTALVTDFGISRLVKGDDSIDSNNNSSASLSSTRGLLCGSVGYIAPEYGMGKKASTQGDVYSYGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNVVEKALQRLSHSHSGKQHDSSKIWQDVVLELIELGLLCTQYNPLTRPSMMDVAQEIGRLKDYSCNSSSYDETVNSKVDDSFCSEDNLLEK 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1026 995 SUPERFAMILY L domain-like 274 572 - -
Lele22g1026 995 SMART serkin_6 666 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1026 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Lele22g1026 995 ProSiteProfiles Protein kinase domain profile. 666 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1026 995 Gene3D Phosphorylase Kinase; domain 1 633 741 - -
Lele22g1026 995 Gene3D Ribonuclease Inhibitor 265 598 IPR032675 -
Lele22g1026 995 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 353 961 - -
Lele22g1026 995 FunFam Leucine-rich repeat receptor-like protein kinase 30 192 - -
Lele22g1026 995 Gene3D Ribonuclease Inhibitor 30 197 IPR032675 -
Lele22g1026 995 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lele22g1026 995 Pfam Leucine rich repeat 204 259 IPR001611 GO:0005515
Lele22g1026 995 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Lele22g1026 995 Gene3D Transferase(Phosphotransferase) domain 1 743 987 - -
Lele22g1026 995 FunFam Leucine-rich repeat receptor-like protein kinase TDR 275 593 - -
Lele22g1026 995 SUPERFAMILY Protein kinase-like (PK-like) 645 959 IPR011009 -
Lele22g1026 995 Gene3D Ribonuclease Inhibitor 198 264 IPR032675 -
Lele22g1026 995 Pfam Leucine Rich Repeat 499 518 IPR001611 GO:0005515
Lele22g1026 995 Pfam Leucine Rich Repeat 353 372 IPR001611 GO:0005515
Lele22g1026 995 CDD STKc_IRAK 672 964 - -
Lele22g1026 995 Coils Coil 993 995 - -
Lele22g1026 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 743 973 - -
Lele22g1026 995 SUPERFAMILY L domain-like 40 262 - -
Lele22g1026 995 SMART LRR_typ_2 98 122 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 472 496 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 399 423 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 375 398 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 424 447 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 146 170 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 278 302 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 327 350 IPR003591 -
Lele22g1026 995 SMART LRR_typ_2 351 374 IPR003591 -
Lele22g1026 995 Pfam Protein kinase domain 668 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1026 Lele-ChrLele22 7293765 7297878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1026 32 966 Receptor kinase-like Gene Family AT3G47570 33.916 1.88e-155 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele22g1026 Pkinase 2.2e-44 CL0016