Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1006 ATGTTCATACTGTGTTTGTTCCTGAACATGGCTTACTCAGACAAGAACATGAGTCATGATGTCGGATTCAAGTTTGATGGATACTTCCAGTTGGGACCAGGCCGTGATCAGAAGCTCAGAACTTCCAACATGTCAGCAAAAGTAATACATGCAGATAGTGGCCTAAGTGAAGCATCGCAAGTCTTTTACAATTTTCCTGTTCAATTCAAGAATTCCAATACTTCTCCTTCTTCCGTCTTCTCTTTCTCCACAACCTTTATCTTCGCCGTCGTAGCCACCGATCCTGAATTTGACGGCCACGGACTCGCCTTCGCTATCTCGCCTACTAGAGGTATTCCTCAAGCTCAGCCAAACCAATATCTTGGCCTATTCAATGCCACGTCCAATGGTAAAAGTTCCAATCATCTTGTGGCAATAGAGCTGGACACTGACAAGGATTTTCAGTTTGGTGATATTGATGATAACCATCTTGGCATTGATATCAGTGGGTTGGACTCTGTCAATTCTACTCCTGCAGGTTACTATACAGATCGTGGTCATTTCAGAAAGCTAGATCTTACAAGTGGAGAACCCTTGCAGGTCTGGGTTGAATATAATAGTACTGATCAGAAACTCAGTGTCACGATTCATCCAATAAACATTCCTAAACCTGAGATCCCTCTTCTCACACTGAGAAGAGATCTTTATTCTTATTTCTTTGAGTTTATGTATGTTGGGTTCTCATCCTCTTGTGGCAAAAATTCATCTCATTACATATTGGGTTGGAGTTTCAGGATGAATGGTCAAGCTGAGGAGATTAAACTTTCTCGCCTTCCTAATATTCCTGGACTTTTAGATCCAAATGAAAGTGGTGGAGGGAAAGGAAACAAGGAAATGTTGATAGTTTTAGTATCACTAGTGGGTGTGTTTGTCCTTGTAATCTTGATTTATGGTGCGATTATGATTACGAGGAGGAGGAAATTCATTCAAGTTCTTGAAGATTGGCAAGTCTTGTATGGGCCTCATAGGTTCACTTACAAGGACATATTCATTGCAACAAAAGGGTTCAGAGAGGGACAACTCCTTGGAAGAGGAGGCTTTGGAAGAGTATACAAAGGAATTCTATCATTTTCAAATGTTCAAATAGCAGTGAAAAGGATTTCTCATGATTCAAGACAAGGAATGAGAGAATTCGTCGCAGAAATCGCAACTATCGGCCGTCTCAGGCATCCAAATTTGGTTGCTTGTGGAAGAAGGCCGGTCGAACCTCGGACTTCGCCGGAGAAAGTGCTGATCATAGAATGGGTCATGGATTGCTGGGAAAAAGGAGACATTTGTGAAGCAGTGGATAGCAGATTGGGAGATGAATATGTGGTGGATGAAGCTCAATTGGTGCTCACACTTGGCTTGCTCTGTTCACATCCTAATGCTTCAGCAAGGCCCACTATTTCAAGTATTGTGCAGTTTTTAGATGGAGATTCTCAGTTGCCTGATAACTTGTTGGATTTAGTCAAGTCTAGAAAATTGGGTGGTTGGTCTGGTCAGGGATGTTCCTCATCTTCCTATACTTTTCCTTCTATTGCTTCTTTGACTTTTACAGAACCATTTGCCTCCACAGGCCGCTAA 1605 0.4206 MFILCLFLNMAYSDKNMSHDVGFKFDGYFQLGPGRDQKLRTSNMSAKVIHADSGLSEASQVFYNFPVQFKNSNTSPSSVFSFSTTFIFAVVATDPEFDGHGLAFAISPTRGIPQAQPNQYLGLFNATSNGKSSNHLVAIELDTDKDFQFGDIDDNHLGIDISGLDSVNSTPAGYYTDRGHFRKLDLTSGEPLQVWVEYNSTDQKLSVTIHPINIPKPEIPLLTLRRDLYSYFFEFMYVGFSSSCGKNSSHYILGWSFRMNGQAEEIKLSRLPNIPGLLDPNESGGGKGNKEMLIVLVSLVGVFVLVILIYGAIMITRRRKFIQVLEDWQVLYGPHRFTYKDIFIATKGFREGQLLGRGGFGRVYKGILSFSNVQIAVKRISHDSRQGMREFVAEIATIGRLRHPNLVACGRRPVEPRTSPEKVLIIEWVMDCWEKGDICEAVDSRLGDEYVVDEAQLVLTLGLLCSHPNASARPTISSIVQFLDGDSQLPDNLLDLVKSRKLGGWSGQGCSSSSYTFPSIASLTFTEPFASTGR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1006 534 Gene3D Transferase(Phosphotransferase) domain 1 409 496 - -
Lele22g1006 534 Gene3D - 13 273 - -
Lele22g1006 534 PANTHER - 407 487 - -
Lele22g1006 534 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Lele22g1006 534 CDD lectin_legume_LecRK_Arcelin_ConA 52 261 IPR001220 GO:0030246
Lele22g1006 534 SUPERFAMILY Concanavalin A-like lectins/glucanases 55 263 IPR013320 -
Lele22g1006 534 Pfam Legume lectin domain 47 271 IPR001220 GO:0030246
Lele22g1006 534 Gene3D Phosphorylase Kinase; domain 1 314 408 - -
Lele22g1006 534 ProSiteProfiles Protein kinase domain profile. 349 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1006 534 Pfam Protein kinase domain 350 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g1006 534 SUPERFAMILY Protein kinase-like (PK-like) 328 443 IPR011009 -
Lele22g1006 534 SUPERFAMILY Protein kinase-like (PK-like) 408 494 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1006 Lele-ChrLele22 7088163 7090479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1006 407 534 Receptor kinase-like Gene Family AT4G29050 51.880 6.92e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele22g1006 Lectin_legB 1.7e-61 CL0004