Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1003 ATGAGCAGTGGAAACCGAGTTTTGGTGTGTAAATCAGTTTCCCTCTTCTTCACCCTACCTTCCTGTCTTTCTTGCACTCAACTTCGATCCAAATTCGTTGCAGCTCGCGCTTGGTCTCCCGCTGCTTCTAGGATTTATCGGCGAATGGCCGCCGCAGCTTCATCCTCGCCGTCCTCGGGTAACAACACTTCCGGCAATGTGAATGCTTCTTCTTCCGCAGTTGACGACGCAGCTCCTTCTGCTTCCTCTGCCATTGATTTCCTCTCTATATGTCACAGCCTAAAGACAACAAAAAGAGCAGGATGGATACGTAAAGATGTTAAGGATCCAGAATCTATTGCGGATCATATGTATCGAATGGGATTGATGGCTCTGATTGCTTCAGATATCCCTGGCATAGACCGAAACAAGTGTATAAAAATGGCTATTGTTCACGATATTGCTGAAGCTATTGTTGGGGACATTACCCCATCAGATGGTGTTTCAAAAGAAGAAAAGAGTAGACGAGAAAGAGAAGCACTTGATCACATGTGTAAAGTGATAGGTGGAGGCTCTAGAGCAACGGAAATAGCTGAGTTATGGATGGAGTATGAAGCAAATTCTTCACCAGAAGCTAAATTTGTCAAGGACCTCGACAAGGTGGAGATGATACTTCAAGCCTTAGAATATGAAGATGAGCAGCAGAAGGATTTGGATGAATTTTTCGAGTCAACTGCTGGGAAGTTTCAGACTGAAGTGGGCAAAGCTTGGGCATTGGAAATAGTATCAAGGAGAAAGAAAAATCAACACCCCAAGTCACAATGA 804 0.444 MSSGNRVLVCKSVSLFFTLPSCLSCTQLRSKFVAARAWSPAASRIYRRMAAAASSSPSSGNNTSGNVNASSSAVDDAAPSASSAIDFLSICHSLKTTKRAGWIRKDVKDPESIADHMYRMGLMALIASDIPGIDRNKCIKMAIVHDIAEAIVGDITPSDGVSKEEKSRREREALDHMCKVIGGGSRATEIAELWMEYEANSSPEAKFVKDLDKVEMILQALEYEDEQQKDLDEFFESTAGKFQTEVGKAWALEIVSRRKKNQHPKSQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1003 267 Pfam HD domain 91 249 IPR006674 -
Lele22g1003 267 FunFam HD domain-containing protein 2 72 262 - -
Lele22g1003 267 SMART hd_13 109 226 IPR003607 -
Lele22g1003 267 PANTHER UNCHARACTERIZED 37 262 IPR039356 GO:0002953
Lele22g1003 267 MobiDBLite consensus disorder prediction 54 73 - -
Lele22g1003 267 ProSiteProfiles HD domain profile. 113 217 IPR006674 -
Lele22g1003 267 Gene3D Hypothetical protein af1432 69 266 - -
Lele22g1003 267 SUPERFAMILY HD-domain/PDEase-like 82 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1003 Lele-ChrLele22 7068591 7072109 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1003 22 7068591 7072109 Lele22g1003 22 7068591 7072109 ECH
Lele22g1003 22 7068591 7072109 Lele23g1062 23 16197289 16201201 hybridization
Lele22g1003 22 7068591 7072109 Lele24g0977 24 7040133 7043801 hybridization