Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0991 ATGCAAAATCCCAGCGCAGAGAAGCTAGAATTTCTCCAGAAATGGAGGGAGGGTATGGGAAAATGCACGTCCCTCAAGAAGAACATGAGCTTGTTGGAGAGGAAGAAGGCCATAAAAGTTTCAGCAGATTTAGCCATGGCTTCTACCAGAACTGAAACCAAGTGTTGGAGCCGAGCCCTTATTGCAAATATTGCTTCCAGAGATCACCACAGCAAACTCCTGACGGAGCACATAATAGGGTCTTCTCAGTGCTTCAGTCTAAGAAAAGCTTTCACTTCTTCTTCTTCGTCTTCTTCGTCTCTGCTTAAGAACAAGAAGATGCTTAATAGAAACTGCAGAACGAAGATCATGAAGAGAAGGAGCCGTACAGTTCGCAGTAGAGTGAAGAAAATAGCGATGGCGGATTCTCTTGCAAGGATGCTGGTCCAAAAGAGAACTCAAATGCTTAAGAAGCTTGTTCCAGGGGGCGAACTTATGGACGATGATGTCTCCTTGGTTGAAGAAACCCTAGATTATATTCGATCCCTCCGATCTCAAGTTCAAGTAATGCGCTGTCTTCTCTCTACCTCCCACCTCATGAAATGTTCCTAA 591 0.4467 MQNPSAEKLEFLQKWREGMGKCTSLKKNMSLLERKKAIKVSADLAMASTRTETKCWSRALIANIASRDHHSKLLTEHIIGSSQCFSLRKAFTSSSSSSSSLLKNKKMLNRNCRTKIMKRRSRTVRSRVKKIAMADSLARMLVQKRTQMLKKLVPGGELMDDDVSLVEETLDYIRSLRSQVQVMRCLLSTSHLMKCS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0991 196 CDD bHLH_AtIBH1_like 140 187 IPR044549 GO:0006355
Lele22g0991 196 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 188 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0991 Lele-ChrLele22 6966697 6967287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0991 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.896 2.15e-34 118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0991 22 6966697 6967287 Lele22g0991 22 6966697 6967287 ECH
Lele22g0991 22 6966697 6967287 Lele23g1071 23 16282462 16283055 hybridization
Lele22g0991 22 6966697 6967287 Lele24g0968 24 6921954 6922725 hybridization