Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0987 ATGGCTCTCAACATGAAAGCAGTGTTAGTAATGGTGCTTGCCATCTTGAGCATTTTCTCAGTGGCGTCTGCTCTTTCTGGAACTGCCACCTTTTACACTACTTATGTTCCATCGGCATGCTATGGATATCAAAATCAAGGGACTATGATTGCAGCAGCAAGCGACCCGGTCTTTAACAATAGAGCTGCGTGTGGAAGAATGTACAGAGTTACCTGCACTAGTGGTACCAACAGTGTGCCTAATCCGTGCAAGGCCGGAAGCGTCACCGTCAAGGTCGTCGATCGCTGCCCTTCACCGGGATGCCAAGCAACCTTGGATCTCTCTCAGGAAGCATTCCGTATCATCGCTAACCCTGACGCAGGAAAAGTCAACATTAACTACGTCCGGGTCTGA 393 0.4936 MALNMKAVLVMVLAILSIFSVASALSGTATFYTTYVPSACYGYQNQGTMIAAASDPVFNNRAACGRMYRVTCTSGTNSVPNPCKAGSVTVKVVDRCPSPGCQATLDLSQEAFRIIANPDAGKVNINYVRV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0987 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 128 IPR044206 GO:0009627|GO:0048046
Lele22g0987 130 SUPERFAMILY Barwin-like endoglucanases 13 130 IPR036908 -
Lele22g0987 130 Gene3D - 17 130 IPR036908 -
Lele22g0987 130 Pfam Lytic transglycolase 51 127 IPR009009 -
Lele22g0987 130 FunFam Barwin-related endoglucanase 24 129 - -
Lele22g0987 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 130 IPR007112 -
Lele22g0987 130 SMART dpbb_1 50 127 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0987 Lele-ChrLele22 6929833 6930455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0987 7 130 Expansin Gene Family AT4G01630 31.757 1.28e-07 47.0