Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0982 ATGGCTCTCAAAATGAAAGTAGTGTTAGTAATGGGACTTGCCATGTTGAGCCTTATCTCTGTGGCATATGCTATTTCTGGAACTGCCACCTTTTACACTCAATACGTTCCATCTGCATGCAATGGATTCCAAGACCAGGGAATTATGATCGCCGCGGCCAGCGACTCCATCTGGGACAACGGAGCTGCATGCGGGAGACTGTATAGGGTCAGGTGCATGAGTGGGACCAACCAAGGTGAGGCTCAGCCTTGCCGGGGTGGAGCCGTCACCGTCAAGATTGTGGATCGCTGCCCTTCTCCGGCATGCAGAGGAACCATCGATCTCTCTCAGCAAGCCTTCTCTTCCATCGCTGACCCTAACGAAGGAAAAATCAACATTGAATACGCCCAGGTATAA 396 0.5126 MALKMKVVLVMGLAMLSLISVAYAISGTATFYTQYVPSACNGFQDQGIMIAAASDSIWDNGAACGRLYRVRCMSGTNQGEAQPCRGGAVTVKIVDRCPSPACRGTIDLSQQAFSSIADPNEGKINIEYAQV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0982 131 SUPERFAMILY Barwin-like endoglucanases 15 131 IPR036908 -
Lele22g0982 131 Gene3D - 23 131 IPR036908 -
Lele22g0982 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 131 IPR007112 -
Lele22g0982 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 130 IPR044206 GO:0009627|GO:0048046
Lele22g0982 131 FunFam Barwin-related endoglucanase 24 130 - -
Lele22g0982 131 Pfam Lytic transglycolase 51 128 IPR009009 -
Lele22g0982 131 SMART dpbb_1 50 128 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0982 Lele-ChrLele22 6900437 6901096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0982 49 121 Expansin Gene Family AT2G45110 35.065 4.61e-08 48.1