Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0970 ATGGGATCCAACCTCAGTTGCTTTGGTTCAGACAAAGTCGAAGAAGTGCTAGGATCTGGTAGTGTAGCGAAGAATAAGTCATGGAGAATATTCACATACAAGGAGTTGCATGCAGCCACCAATGGTTTCAGTGAGGATTGTAAACTTGGTGAAGGTGGCTTTGGAAGTGTCTACTGGGGAAAAACCACTGATGGTCTCCAGATAGCAGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTCGCAGTAGAAGTAGAAGTTCTGGGAAGGGTAAGGCACAAGAATTTGCTAGGCCTCAGAGGTTACTGCGCCGGCGACGAACAACGACTCATAGTTTACGATTACATGCCAAATCTCAGCCTTCTCTCTCACCTCCATGGCCAGTTCGCCGCCGAAGTCCAGCTCGACTGGAAAAGAAGAATGAACATCGCTATCGGCTCAGCTCAAGGCCTACTGTACTTGCATCATGAGGTAACGCCTCATATAATCCACAGAGATATAAAGGCAAGCAATGTTCTGCTAAACTCAGACTTCGAGCCACTGGTTGCTGATTTTGGGTTTGCGAAGCTAATCCCAGAAGGGGTAAGCCACCTAACGACCCGTGTGAAGGGCACTCTAGGGTATTTAGCTCCTGAGTACGCCATGTGGGGTAAGGTCTCTGAAAGCTGCGATGTTTATAGCTTTGGGATTCTTCTGTTAGAGCTGGTAACAGGAAGGAAGCCCATAGAGAAGCTACCAGGAGGGCGAAAGAGAACCATAACTGAGTGGGCCGAACCATTCATAAGCAAAGGCAAGTTCAGGGAAATGGTGGATCGAAGACTTAGAGGTAACTTCGATGAGAAACAAGTGGAACAGATGATCAATGTGGCTGCTCTCTGTGTTCAGAGTGAGCCTGAGAAGAGGCCAAACATGAAGCAAGTGGTTAATCTGTTGAAAGGGTATGAAGCAGATCATGGGATGGTGATGAAGACGAGGATAGATAGTATTAAGTATAATGAACAGCTTATGGAGCTTGATCAGAGTAGTGATAATGATGATGAAGATGAAACCAATGGAGGTTATGGTGTTTTTAGTGCTCTTGAGGTCCAAAAGATGCATGATCCTTACAAGCAACGCCATGGTGATGCAAAAATGGCGAAACCAATTTGA 1158 0.4577 MGSNLSCFGSDKVEEVLGSGSVAKNKSWRIFTYKELHAATNGFSEDCKLGEGGFGSVYWGKTTDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGDEQRLIVYDYMPNLSLLSHLHGQFAAEVQLDWKRRMNIAIGSAQGLLYLHHEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGRKRTITEWAEPFISKGKFREMVDRRLRGNFDEKQVEQMINVAALCVQSEPEKRPNMKQVVNLLKGYEADHGMVMKTRIDSIKYNEQLMELDQSSDNDDEDETNGGYGVFSALEVQKMHDPYKQRHGDAKMAKPI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0970 385 PANTHER OS01G0253100 PROTEIN 24 319 IPR045271 -
Lele22g0970 385 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 118 - -
Lele22g0970 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Lele22g0970 385 SUPERFAMILY Protein kinase-like (PK-like) 25 314 IPR011009 -
Lele22g0970 385 FunFam PTI1-like tyrosine-protein kinase At3g15890 119 332 - -
Lele22g0970 385 Gene3D Phosphorylase Kinase; domain 1 17 118 - -
Lele22g0970 385 SMART serkin_6 43 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0970 385 Pfam Protein tyrosine and serine/threonine kinase 47 314 IPR001245 GO:0004672|GO:0006468
Lele22g0970 385 ProSiteProfiles Protein kinase domain profile. 43 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0970 385 Gene3D Transferase(Phosphotransferase) domain 1 119 331 - -
Lele22g0970 385 CDD STKc_IRAK 49 316 - -
Lele22g0970 385 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0970 Lele-ChrLele22 6778254 6780129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0970 2 367 Trihelix Transcription Factor Family AT1G70460 44.444 1.48e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele22g0970 PK_Tyr_Ser-Thr 1.5e-44 CL0016