Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0969 ATGCTTTCTTCTTCTTCTTCTTCTTCACCTAGTGAAATACTTATTGGTCTGCCTTTAGACCCAGATGACAGCAGAGAACTTCTCTCGTGGGCGATTCGAGTTCTTGCCAATCCAAATGACACCATTGTCGCCCTCCATGTTCTAGTTTCTATGGATAGGAAGAAGAGGAAGAAGAAGCGTGCTTCAGTGGCTAGAAGGCAATCGCAACTTCGACAGGCTAAAGCATATGCCATTTCTGTGCTTGGTGAATTTGCAAAGACGTGTTGGTCTAAGCAGGTGAATCTGGAAGCCAAAGTGGCATTTAGTTCCAATGTAGGTGGAGGTTTAGTTGAAGAAGCCAAGTCCATATCTGCTGGCTTTCTTCTTCTTCGTGGCTCAAGAAACCAGTCTAATAAAAAGAATCAGGCCTCTGATGGAATTACCAAGTTCTGCTTTGAGAATGTTCATGAAAGCTGCACTGTTGTCTCAGTTGGTAAAACTTCCAAACTCAGTTTTACAAATTCTCAAGATAATTATGAATCAAGCTCAGGGTGGTTTAAGGAGGATAAGCAGAGTAGTAACAGGGGAACATCCCCTGTTTTGAAGGCTTTTATCGCAGACTCTAACAAGACTCAGACACGCTCACCAAGAACAGTATTGGACGCACTTGAGGGTCAATCTAACAGCACAGAAGATGATAATACCTTTAGCACAAGGGTTTCAAGCATCACAGACACTCCTTCAACAGGTTCTAATAAGATCAAAAGCCAATGCAATGATTTAAGGAAACCACCACAGTCACCATTCAGATTCATAGCCTCACTTATTGCCTCACCATTATTATTAAGAAGGAAGAACTCCAAAAAGTCCCAAAATGAAAAGAGACAACCCTTGTTGAAATGCTTCAGCTATGAAGAAATCTCCACCGCCACAAATGGCTTCCACCAAGAGAATTTGGTGGGACGAGGTGGGTACTCTGAAGTATACAGAGGAGATCTTTCTGATGGACAAACACTTGCAGTGAAAAGGTTGTCCAAAGACAACAAGGATGCTAACAAGGAAAAGGAGTTCCTCATGGAACTAGGAGTCATCGGACATGTCTGTCATCCAAATACTGCATCCTTAGTTGGATGCTGCATTGAAAATGGACTCTATCTGATCTTCAAGTACTCTCAAAATGGAAACTTGGCCACTGCACTGCATGGTAAATCGGCAACATCACTTGAGTGGCCAGTGAGATACAGAATCGCCATTGGAGTAGCAAGGGGATTGCATTATCTTCACAAGTGTTGCAAACGCAGAATAATTCATCGTGACATTAAAGCCTCCAATGTGCTACTTGGTCCAGATTATGAACCACAGGCAAAGCCTCTGATGGAATCAGGGAACATTAGGGAGCTAGCAGATCCGAGAATGGAAGGCGTATACGATGAAGATGAATTGCAGAGAGTAGTAATCACAGCTTCATACTGTGTGAGACAATCTCCTCTTTGGCGTCCCCCGATGAGCGAGGTGTTGGAGCTGCTGACCAGTGGAGAAGAAAGTGAGGCAGGGAATAGTTGGAGGATCCCAAAGTTCACATCTGATGAATTGGATGATTATTCTATGGCTTTTGGATATGAACTGCCTTCTGACATATCTCTTGAGGAGTTTTTGTGA 1638 0.4322 MLSSSSSSSPSEILIGLPLDPDDSRELLSWAIRVLANPNDTIVALHVLVSMDRKKRKKKRASVARRQSQLRQAKAYAISVLGEFAKTCWSKQVNLEAKVAFSSNVGGGLVEEAKSISAGFLLLRGSRNQSNKKNQASDGITKFCFENVHESCTVVSVGKTSKLSFTNSQDNYESSSGWFKEDKQSSNRGTSPVLKAFIADSNKTQTRSPRTVLDALEGQSNSTEDDNTFSTRVSSITDTPSTGSNKIKSQCNDLRKPPQSPFRFIASLIASPLLLRRKNSKKSQNEKRQPLLKCFSYEEISTATNGFHQENLVGRGGYSEVYRGDLSDGQTLAVKRLSKDNKDANKEKEFLMELGVIGHVCHPNTASLVGCCIENGLYLIFKYSQNGNLATALHGKSATSLEWPVRYRIAIGVARGLHYLHKCCKRRIIHRDIKASNVLLGPDYEPQAKPLMESGNIRELADPRMEGVYDEDELQRVVITASYCVRQSPLWRPPMSEVLELLTSGEESEAGNSWRIPKFTSDELDDYSMAFGYELPSDISLEEFL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0969 545 FunFam Putative receptor-like serine/threonine-protein kinase 275 383 - -
Lele22g0969 545 Pfam Protein tyrosine and serine/threonine kinase 309 441 IPR001245 GO:0004672|GO:0006468
Lele22g0969 545 SMART serkin_6 307 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0969 545 Gene3D HUPs 3 157 IPR014729 -
Lele22g0969 545 Gene3D Transferase(Phosphotransferase) domain 1 447 518 - -
Lele22g0969 545 Gene3D Transferase(Phosphotransferase) domain 1 385 446 - -
Lele22g0969 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Lele22g0969 545 Coils Coil 334 354 - -
Lele22g0969 545 Gene3D Phosphorylase Kinase; domain 1 269 383 - -
Lele22g0969 545 ProSiteProfiles Protein kinase domain profile. 307 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0969 545 PANTHER OS08G0249100 PROTEIN 448 515 - -
Lele22g0969 545 MobiDBLite consensus disorder prediction 216 256 - -
Lele22g0969 545 MobiDBLite consensus disorder prediction 166 188 - -
Lele22g0969 545 Pfam Universal stress protein family 17 136 IPR006016 -
Lele22g0969 545 MobiDBLite consensus disorder prediction 216 259 - -
Lele22g0969 545 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Lele22g0969 545 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 128 - -
Lele22g0969 545 SUPERFAMILY Protein kinase-like (PK-like) 283 445 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0969 Lele-ChrLele22 6771216 6774688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0969 264 447 Receptor kinase-like Gene Family AT1G53420 43.979 8.97e-41 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele22g0969 PK_Tyr_Ser-Thr 2.4e-23 CL0016