Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0967 ATGGGAATTGAAAGAGGAGGCCTTAAGGGCATACGTGGCGGGTGGAGCGTCCCCGCGAAGCCATGCGACTCTTGCAAATCGGCCGCCTCCGCCGTGTTCTGCCGCGCCGATTCCGCCTTCCTCTGCATGGCCTGTGACTCCCGAATTCACTGCGGTAATAAGCTCGCTTCCCGCCACGAGCGTGTTTGGATGTGCGAGGTTTGTGAGCAGGCCCCTGCTTCCGTCACTTGCAAGGCCGACGCCGCCGCTCTCTGTGACACCTGCGATTCTGACATCCACTCCGCCAACCCGCTCGCTCGCCGCCACGAGCGCGTCCTGGTGGAGCCCTTTTATGACTCCGCTGAGTTGGTGGTGAAATCCTCTGCCGCCGTTGCTGCTTTCAACTTCTTCGTCCCCAGCGATAACAACGGGATTTGCTCCGATGGGTTCCAAACCGACGATCCCGAACCAGTTCCGTGGATGGTCCCCAACCAGAATTTCAATTCCAAGGTCGTGTGTGCTCCGGAAGTCAAGTCCGGCGATATGTTCTTCACGGAAATGGATCCGTTTATGGATTTCGATTACTCCAATTCTTATCAGAATAACAGCAATCACGACGCGGCAAACGACAGCGTGGTGCCAGTTCAAAACAAGCCTGTCACGGCTCCGATGATCAATCACTCGGAGAGTTGCTTCGATATTGATTTTTGCAGATCGAAGCTTTCTTCTTTTAGCAGCTACCCAAGCCAAAGTGTTTCGTCGTCTTCGCTTGATGTTGGGGTTGTACCAGACTCAGTGTCAGAAATGTCGTTCTCCTTGGGGCGAAACAAGAGCAACAGCTCCGAATCCGGCGGAATCGGGTCGGCGGGTAACAACCAGGCGACCCAACTGGGCGGGATGGACCGGGAAGCGAGGGTGTTGAGGTACAGAGAGAAAAGGAAGAACCGGAAGTTCGAGAAAACTATCCGATACGCTTCAAGGAAAGCGTACGCGGAGACCCGACCCAGGATCAAGGGTCGGTTCGCTAAACGGATCGAAACCGAATCTGAGGTAGACCGGGTGTACAGCCCCGTCAGCTCAGGGGGTCTGGTGATGGACGCTCAGTACGGCGTCGTACCATCGTTTTAA 1107 0.5556 MGIERGGLKGIRGGWSVPAKPCDSCKSAASAVFCRADSAFLCMACDSRIHCGNKLASRHERVWMCEVCEQAPASVTCKADAAALCDTCDSDIHSANPLARRHERVLVEPFYDSAELVVKSSAAVAAFNFFVPSDNNGICSDGFQTDDPEPVPWMVPNQNFNSKVVCAPEVKSGDMFFTEMDPFMDFDYSNSYQNNSNHDAANDSVVPVQNKPVTAPMINHSESCFDIDFCRSKLSSFSSYPSQSVSSSSLDVGVVPDSVSEMSFSLGRNKSNSSESGGIGSAGNNQATQLGGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRIETESEVDRVYSPVSSGGLVMDAQYGVVPSF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0967 368 Pfam CCT motif 295 337 IPR010402 GO:0005515
Lele22g0967 368 MobiDBLite consensus disorder prediction 265 291 - -
Lele22g0967 368 MobiDBLite consensus disorder prediction 265 296 - -
Lele22g0967 368 CDD Bbox1_BBX-like 21 64 - -
Lele22g0967 368 SMART bboxneu5 65 107 IPR000315 GO:0008270
Lele22g0967 368 SMART bboxneu5 17 64 IPR000315 GO:0008270
Lele22g0967 368 CDD Bbox1_BBX-like 65 107 - -
Lele22g0967 368 ProSiteProfiles CCT domain profile. 295 337 IPR010402 GO:0005515
Lele22g0967 368 Pfam B-box zinc finger 62 106 IPR000315 GO:0008270
Lele22g0967 368 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 21 349 IPR045281 GO:0009909
Lele22g0967 368 ProSiteProfiles Zinc finger B-box type profile. 17 64 IPR000315 GO:0008270
Lele22g0967 368 ProSiteProfiles Zinc finger B-box type profile. 60 107 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0967 Lele-ChrLele22 6760881 6762117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0967 1 368 C2C2-CO-like Transcription Factor Family AT5G57660 53.034 3.17e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele22g0967 zf-B_box 1.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0967 22 6760881 6762117 Lele22g0967 22 6760881 6762117 ECH
Lele22g0967 22 6760881 6762117 Lele23g1090 23 16454841 16456066 hybridization
Lele22g0967 22 6760881 6762117 Lele24g0940 24 6680862 6682092 hybridization