Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0960 ATGGGGTTTGCAGGCAGTATTGGAAAGTATAGACTTGGGCGAACGATTGGAGAAGGGACATTCGCTAAGGTTAAGCTTGGTGTTAACAACATCAATGGTGAATATGTAGCGATCAAGATCCTTGATAAGAAAATGGTCATGGAGAGCCATCTCAAGTATCAGGTCCAAAGAGAGATAAGAACAATGAAGCTCCTGAACCATCCCAATATTGTCAGAATCCATGAGGTACTTGGCACGAAGACGAAGATATATATTGTGATGGAGTATGTATCAGGAGGACAATTATCAGACAAGCTGTCTTATTCCAAGAAGTTGAATGAGAATGAAGCAAGGAAACTTTTTCAGCAACTTATTGATGCTGTAGATTACTGCCATAACAAAGGAGTTTACCATAGAGATCTTAAGCCAGCAAACTTGCTTCTCGACAGCAAAGGGAATCTCAAGCTGTCTGATTTCGGACTAAGCGCACTGAGAAAGCCTGATAATGTTCTAACAACTGCTTGTGGTTCCCCAAGCTATGTGGCACCTGAGCTTCTATGGAACAAGGGCTACGACGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATACTTTTTGAGTTACTTTCAGGTTATCTTCCTTTTGATGACCAAAACTTGATGAACTTGTATAAGAAGATATGTAGAGCAGATTATACCTGTCCACCATGGTTTACAGTAAGTCAAAGGAAACTAATTGGCAAAATACTCGAACCACGAGTTATAAAGAGAATAACTATGCCAGAGATCATGGAAGATGAATGGTTTCAAACAGATTATGTTCCTGCTTGTGAATCCGAGTGTGATCAGAACATTCACATGGATGATGTTAATGCAGCTTTTGATTCAGTTGAGGAGAATATTTTAGAGGAAACAATTCCCAAGTCCTCAAGTTTCATTAATGCTTTCCAACTTATAGCCATGTCTGAGGACCTCGATCTATCGGGCCTTTTCGAAGAACAGGATCACAAGCAGAAAACAAGACTAGGTTCCAAGCACAACATCCATGAAACCATAGAGAAAATAGAAACTGCTGCAACAGATGTGAAATTGTCCATAGAAAAAATGAACAACTTCACGTTAAAAATGCACCAGAAACGAACGATGATGACTAGATGTTCCAGATCATATTATGACCTATCAGCTAAGGTGATTGAAGTTGCTCCAGCTCATTGTGTTATTGAAATATCAAAATCTACAGGAGATTTAAGAACATACAAAGAATTTTGTGAAAATCTATCCAATCTACTGGCAGAAAAATCTGTTGCATCATCTCAATCCCAAGAGTCTGTGGAATAA 1317 0.3941 MGFAGSIGKYRLGRTIGEGTFAKVKLGVNNINGEYVAIKILDKKMVMESHLKYQVQREIRTMKLLNHPNIVRIHEVLGTKTKIYIVMEYVSGGQLSDKLSYSKKLNENEARKLFQQLIDAVDYCHNKGVYHRDLKPANLLLDSKGNLKLSDFGLSALRKPDNVLTTACGSPSYVAPELLWNKGYDGAAADVWSCGVILFELLSGYLPFDDQNLMNLYKKICRADYTCPPWFTVSQRKLIGKILEPRVIKRITMPEIMEDEWFQTDYVPACESECDQNIHMDDVNAAFDSVEENILEETIPKSSSFINAFQLIAMSEDLDLSGLFEEQDHKQKTRLGSKHNIHETIEKIETAATDVKLSIEKMNNFTLKMHQKRTMMTRCSRSYYDLSAKVIEVAPAHCVIEISKSTGDLRTYKEFCENLSNLLAEKSVASSQSQESVE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0960 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lele22g0960 438 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Lele22g0960 438 Gene3D Transferase(Phosphotransferase) domain 1 95 289 - -
Lele22g0960 438 SUPERFAMILY Protein kinase-like (PK-like) 7 307 IPR011009 -
Lele22g0960 438 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0960 438 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Lele22g0960 438 FunFam Non-specific serine/threonine protein kinase 301 427 - -
Lele22g0960 438 Gene3D Kinase associated domain 1, KA1 301 426 - -
Lele22g0960 438 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Lele22g0960 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 414 - -
Lele22g0960 438 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0960 438 FunFam Non-specific serine/threonine protein kinase 4 303 - -
Lele22g0960 438 Pfam NAF domain 304 361 IPR004041 GO:0007165
Lele22g0960 438 CDD CIPK_C 307 420 - -
Lele22g0960 438 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Lele22g0960 438 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0960 Lele-ChrLele22 6715580 6718343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0960 7 419 CBL-interacting serine-threonine protein kinases AT1G01140 48.804 3.64e-148 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele22g0960 Pkinase 9.9e-72 CL0016