Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0957 ATGGGTCGAGCTCCATGCTGTGACAAGGCTAACGTCAAGAAAGGACCTTGGTCCCCCGAAGAAGATGCTATACTCAAAGCCTATATCGAAAAACTGAGATGGTTAAATTATCTGAGGCCTAATATCAAGCATGGCGGGTTTACTGAAGAAGAAGACAACATCATCTGTAGCCTTTACATTAGCATCGGAAGCAGGTGGTCCATAATCGCAGCACAGCTACCAGGAAGAACAGACAATGACATAAAGAACTACTGGAACACCAGATTGAAGAAGAAGTTACTGGGAAGAAGAAAACAATCGTCTGGTTTCAATAATCCAAGAGACAGAAACGGATTATCGGGAAACGAACTTGATGATTCATCAAATGCCCTAAGCAACTCGGCTCTTGAACGCCTTCAACTTCATATGCAACTTCATCATCATCAAGGCCTCCAAAACCTAAACCTTACTTTCTCTAATTTCTTCAACAATCCTTCGCTTCTCTGGCCCACCACCAATAAGCTCCATCATCCTCTGATGATGACTGGTAATAATAATAAAAACCTTGATCATCAGCCACAAAAAGAACATGAGCAATTCTACAAACCAACAGTTCCATCTAGTACGGCTAATAATACCTCTCTTCAACAACAAGAACATGGTGAAAAGATCAATGGTTCTTCTTCACAGGTTGACATGTCTGTTCCTTTCAGGGCTACTGGGATTGATCCAATGGATTCTAATAGTATGGCAACGATGAGACTAGAAGGAGGAGTTCATCATCAGCAGCAGCAGAATCATCAGCAAGTTTCTGCACTTCAAGCTGAGTTGCATGAGATTATTCTCAGCAATAATATGACACAGCAGGATAATCAAGATCAGATGTCTGATTTTGATTGTTTTGCAGGGATGAATTCGAACGATTCTTCAAAGGACATGAACTTGATGAACATGTGGTGGTCCAACAATGATTTAATGGCTAAATCAGCATCTTCCAGTTCTTGGGGTTCCAGTACAAGCACAAGTACTGCTGTTCTTCAGCCAGAAGAAGGGATGTTTCAAGATAATTATAATGAACTCGTGGCCGGTTATAGTTTGTAG 1080 0.412 MGRAPCCDKANVKKGPWSPEEDAILKAYIEKLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSSGFNNPRDRNGLSGNELDDSSNALSNSALERLQLHMQLHHHQGLQNLNLTFSNFFNNPSLLWPTTNKLHHPLMMTGNNNKNLDHQPQKEHEQFYKPTVPSSTANNTSLQQQEHGEKINGSSSQVDMSVPFRATGIDPMDSNSMATMRLEGGVHHQQQQNHQQVSALQAELHEIILSNNMTQQDNQDQMSDFDCFAGMNSNDSSKDMNLMNMWWSNNDLMAKSASSSSWGSSTSTSTAVLQPEEGMFQDNYNELVAGYSL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0957 359 MobiDBLite consensus disorder prediction 194 223 - -
Lele22g0957 359 SMART sant 43 91 IPR001005 -
Lele22g0957 359 FunFam Transcription factor MYB36 46 112 - -
Lele22g0957 359 PANTHER OS09G0431300 PROTEIN 1 31 - -
Lele22g0957 359 SUPERFAMILY Homeodomain-like 32 93 IPR009057 -
Lele22g0957 359 MobiDBLite consensus disorder prediction 96 122 - -
Lele22g0957 359 CDD SANT 16 89 IPR001005 -
Lele22g0957 359 MobiDBLite consensus disorder prediction 187 223 - -
Lele22g0957 359 ProSiteProfiles Myb-like domain profile. 9 89 IPR001005 -
Lele22g0957 359 MobiDBLite consensus disorder prediction 98 122 - -
Lele22g0957 359 Gene3D - 45 111 - -
Lele22g0957 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Lele22g0957 359 Pfam Myb-like DNA-binding domain 45 87 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0957 Lele-ChrLele22 6690672 6692008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0957 1 181 MYB Transcription Factor Family AT5G57620 61.836 6.49e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele22g0957 Myb_DNA-binding 5.2e-10 CL0123