Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0954 ATGGCCATGAACTTCCGTTCTTCATCTTCTTCTAACACTTCTTTTCATCATCATCATCATCATCCTTCAAGTGATCATATGAATAACCTTAACCTAGATCTTCTGCTTGAGCTTTCTTCATCTTCTCCTCCAGCTGCTAATAATTACGGTACTATCGAGCCTCGGGTTTTTTCGTGCAACTATTGCCAGAGAAAGTTCTACAGCTCACAAGCTCTGGGAGGTCACCAGAATGCCCACAAGCTGGAGAGAACACTGGCCAAGAAGAGCAGAGAGCTCAGCTCAATGCAGAATTTTGGGCTCGTCTCTGATCATCACAGGTCTAGCAGTACTAGCAGCAGCTTCAATAATGGCTCGAACCATCTTGCGCGTGTCGGCTCACTAAGCCATGGCCAAGCTGCTGGTGGGGTTAGCTATGAAAGAAGAGAGTTTATTAGCTATGGTGGTTCCAACAACCCCAGGTCGTCTTCTGGTTACGTGTCTGAAAGCAGTAATGGTCAGCAGGAAGATATTGGTCAACTTGACTTGTCTTTAAGGCTTTAG 540 0.4574 MAMNFRSSSSSNTSFHHHHHHPSSDHMNNLNLDLLLELSSSSPPAANNYGTIEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSMQNFGLVSDHHRSSSTSSSFNNGSNHLARVGSLSHGQAAGGVSYERREFISYGGSNNPRSSSGYVSESSNGQQEDIGQLDLSLRL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0954 179 MobiDBLite consensus disorder prediction 147 171 - -
Lele22g0954 179 MobiDBLite consensus disorder prediction 147 179 - -
Lele22g0954 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Lele22g0954 179 SUPERFAMILY beta-beta-alpha zinc fingers 54 84 IPR036236 -
Lele22g0954 179 FunFam Zinc finger protein 2 36 105 - -
Lele22g0954 179 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Lele22g0954 179 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 115 IPR044246 GO:0009788
Lele22g0954 179 MobiDBLite consensus disorder prediction 1 26 - -
Lele22g0954 179 Gene3D Classic Zinc Finger 48 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0954 Lele-ChrLele22 6647208 6647747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0954 3 179 C2H2 Transcription Factor Family AT5G57520 40.884 1.31e-24 92.0