Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0949 ATGCTCACACACAAGAGCCTAGTTACAAGTGTGGCTCAACAGGTTGGTGGAGAGAATACTAATCTGTATTTTCACAGCGACGATGTGATTGTGGGCGTTTTGCCGCTGTTTCACATTTATGGATTGAGCTCTGTGTTGCTCTGTGGGCTTCGAGTCGGTGCTGCGATTTTGATCGTTCAGAAGTTTGAGATCGGAACGTTGCTTGAGCTGATACAGAAACACCGAGTGAGCATTGCGCCGTTTGTGCCACCCATAGTGCTGGCCCTTGCGAAGAACCCCAACCTGCATCGATACGACCTGTCGTCTATAAGGATAATATTGTCAGGTGCGGCTCCCCTGGGAAAAGATCTTGAGGATGCTGTGAGGGCTAAGCTTCCCCAAGTCACACTCGGACAGTGCAGGGATATGGAACGACGGAGGCAGGCATGGCCAGTGCTGTCAATAAGCTTAGCGTTTGCTTAA 462 0.5022 MLTHKSLVTSVAQQVGGENTNLYFHSDDVIVGVLPLFHIYGLSSVLLCGLRVGAAILIVQKFEIGTLLELIQKHRVSIAPFVPPIVLALAKNPNLHRYDLSSIRIILSGAAPLGKDLEDAVRAKLPQVTLGQCRDMERRRQAWPVLSISLAFA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0949 153 Pfam AMP-binding enzyme 1 127 IPR000873 -
Lele22g0949 153 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 131 - -
Lele22g0949 153 Gene3D - 1 133 - -
Lele22g0949 153 SUPERFAMILY Acetyl-CoA synthetase-like 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0949 Lele-ChrLele22 6611633 6612856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0949 1 153 Monolignol Biosynthesis Gene Families AT1G51680 68.627 2.50e-67 211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0949 22 6611633 6612856 Lele22g0949 22 6611633 6612856 ECH
Lele22g0949 22 6611633 6612856 Lele23g1105 23 16597054 16604215 hybridization
Lele22g0949 22 6611633 6612856 Lele24g0925 24 6520873 6523033 hybridization