Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0933 ATGGACTCTTCCTCTCACAACTGGCTCGCTTTCTCTCTCTCCAATCACTCTTCTCTTTTTCATTCATTCTCTTCTCCTCCCCCAGGGAGCAACGTCGATGCGTCGCCGGAGGCCACTGTCAGAGGAGGAGGTGCAACCACCAACGACCTCTCCGTCTTCGCCGGAGGCGGTCCCAAGTTCCAGGACTTCCTTGGCGGCAGCTCCTCTGCTACGTCGGTCACAGCTGCAGTGCCCACACCGCCTGCTCCTCATCAGTTCTCCACCGACAACATATTCGGTTCTGAGCTAAAAACCATAGCCGCCGGCTTCCTCCCCGGCTTGGCCGGCGCTGAACAAACCGAGCCGCGAAAGCAGGCGCTGGCTCTCGCAGTGCCATCCTCTAAGAAGACTGCGGATACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTCACTCGGCATAGATGGACAGGGAGATATGAAGCTCATCTATGGGATAATAGTTGCAGAAGAGAAGGTCAAAGTAGGAAAGGAAGGCAAGTTTATTTGGGTGGTTACGATAAGGAAGAGAAAGCAGCGAGAGCTTATGATCTTGCGGCTCTCAAATATTGGGGTCCAAGTACAACCACCAACTTTCCAATTTCGAACTATGAGAAGGAACTGGAAGAGATGAAGAACATGACAAGACAAGAATTTGTTGCTTCACTACGAAGGAAGAGTAGTGGTTTCTCAAGAGGAGCCTCAATATACAGAGGAGTGACCAGGCACCACCAGCATGGGCGATGGCAAGCAAGAATTGGCAGAGTTGCCGGAAATAAAGACCTTTATCTCGGCACTTTTAGTACTCAAGAAGAAGCTGCTGAAGCATATGATATAGCTGCCATAAAATTTAGAGGACTAAGTGCAGTGACCAATTTCGACATGAGCCGATACGACGTGAAGAGCATAGCCAACAGCAGTCTTCCCATCGGTGGATTCTCATCCAAACCTAAAAACTCTTCAGATTCTTCCGCATCAGACACCAAAAGCATCGATGGAAGCCGATCAGCCGATAACAGCATCACCGACCGAGCGTCATCCGCAGCCACCTTCGCATCCCAACCGGCCTCAACCTCGAACCTCAGCTTCGCCATACCCATCATCAAACAAGACCCAACCATTGATTACTGGTCCAATATCTTGGGGTACCATCAGAACCCTTCCTCTCATCTCAGAAACACTTGCAACAACAATGTTACCATCGCCTCTCCTTTACAAAGCTACAACAACAATAATAACAACACAACTGTACCGTTCAGCTTGGAGTTGCAGAGAAATAACAACGCATTTATGGATGGGGGTGTGATTGTTCAGAACATTCAGGTTCAGCAGCAGCAGCCACAAAGTGGAAGCAATAATAACAATAACAGAAGTAGTGGAACTGTGGAATCAAGTTCAAGTTCAGGGATCCCATTGGGGACACCAATAGGTATAAATAATAGTAACAGTAGTTATGAGAGTTCTTGGCTGCACTCATTCCAAACACATGCAAAAGGAAGTCTCTTTCAAACGCCAATATTTGGGATGGAATGA 1551 0.4868 MDSSSHNWLAFSLSNHSSLFHSFSSPPPGSNVDASPEATVRGGGATTNDLSVFAGGGPKFQDFLGGSSSATSVTAAVPTPPAPHQFSTDNIFGSELKTIAAGFLPGLAGAEQTEPRKQALALAVPSSKKTADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPISNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLSAVTNFDMSRYDVKSIANSSLPIGGFSSKPKNSSDSSASDTKSIDGSRSADNSITDRASSAATFASQPASTSNLSFAIPIIKQDPTIDYWSNILGYHQNPSSHLRNTCNNNVTIASPLQSYNNNNNNTTVPFSLELQRNNNAFMDGGVIVQNIQVQQQQPQSGSNNNNNRSSGTVESSSSSGIPLGTPIGINNSNSSYESSWLHSFQTHAKGSLFQTPIFGME 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0933 516 Gene3D AP2/ERF domain 140 208 IPR036955 GO:0003700|GO:0006355
Lele22g0933 516 Gene3D AP2/ERF domain 242 302 IPR036955 GO:0003700|GO:0006355
Lele22g0933 516 SUPERFAMILY DNA-binding domain 139 208 IPR016177 GO:0003677
Lele22g0933 516 CDD AP2 139 208 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 ProSiteProfiles AP2/ERF domain profile. 242 300 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 FunFam AP2-like ethylene-responsive transcription factor ANT 139 208 - -
Lele22g0933 516 FunFam AP2-like ethylene-responsive transcription factor 241 302 - -
Lele22g0933 516 SMART rav1_2 242 306 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 SMART rav1_2 140 212 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 PRINTS Ethylene responsive element binding protein signature 282 302 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 PRINTS Ethylene responsive element binding protein signature 141 152 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 ProSiteProfiles AP2/ERF domain profile. 140 206 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 SUPERFAMILY DNA-binding domain 241 302 IPR016177 GO:0003677
Lele22g0933 516 CDD AP2 241 302 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 MobiDBLite consensus disorder prediction 22 43 - -
Lele22g0933 516 MobiDBLite consensus disorder prediction 317 346 - -
Lele22g0933 516 MobiDBLite consensus disorder prediction 449 481 - -
Lele22g0933 516 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 90 412 - -
Lele22g0933 516 Pfam AP2 domain 242 292 IPR001471 GO:0003700|GO:0006355
Lele22g0933 516 Pfam AP2 domain 140 198 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0933 Lele-ChrLele22 6437665 6440508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0933 81 516 AP2-EREBP Transcription Factor Family AT5G57390 56.140 8.06e-157 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele22g0933 AP2 3.9e-13 CL0081